RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 CBX4O00257 560 aa17.24■□□□□ 0.35
APOBEC3F-203ENST00000476513 HNF1BP35680 557 aa17.24■□□□□ 0.35
APOBEC3F-203ENST00000476513 ASPAP45381 313 aa17.24■□□□□ 0.35
APOBEC3F-203ENST00000476513 EFEMP1Q12805 493 aa17.24■□□□□ 0.35
APOBEC3F-203ENST00000476513 SLC39A14Q15043 492 aa17.24■□□□□ 0.35
APOBEC3F-203ENST00000476513 CNNM4Q6P4Q7 775 aa17.24■□□□□ 0.35
APOBEC3F-203ENST00000476513 GATAD2AQ86YP4 633 aa17.24■□□□□ 0.35
APOBEC3F-203ENST00000476513 DENND1CQ8IV53 801 aa17.24■□□□□ 0.35
APOBEC3F-203ENST00000476513 CPXM2Q8N436 756 aa17.24■□□□□ 0.35
APOBEC3F-203ENST00000476513 ZNF366Q8N895 744 aa17.24■□□□□ 0.35
APOBEC3F-203ENST00000476513 CYFIP2Q96F07 1278 aa17.24■□□□□ 0.35
APOBEC3F-203ENST00000476513 FCRL3Q96P31 734 aaPredicted RBP17.24■□□□□ 0.35
APOBEC3F-203ENST00000476513 TWNKQ96RR1 684 aa17.24■□□□□ 0.35
APOBEC3F-203ENST00000476513 TMEM245Q9H330 911 aa17.24■□□□□ 0.35
APOBEC3F-203ENST00000476513 CLIC5Q9NZA1 410 aa17.24■□□□□ 0.35
APOBEC3F-203ENST00000476513 TMEM131Q92545 1883 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 A0A1B0GTQ1 180 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 ENC1O14682 589 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 STX6O43752 255 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 DFNA5O60443 496 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 BCAT1P54687 386 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 RPS14P62263 151 aaKnown RBP17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 AMPD3Q01432 767 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 EHHADHQ08426 723 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 SGSM1Q2NKQ1 1148 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 C8orf34Q49A92 452 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 FNDC3BQ53EP0 1204 aaKnown RBP17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 SPOPLQ6IQ16 392 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 ADAT2Q7Z6V5 191 aaKnown RBP17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 DDI1Q8WTU0 396 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 USP28Q96RU2 1077 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 CDK5RAP1Q96SZ6 601 aaKnown RBP17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 CGNQ9P2M7 1197 aaKnown RBP17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 USP3Q9Y6I4 520 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 AK5Q9Y6K8 562 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 MAST4O15021 2626 aa17.23■□□□□ 0.35
APOBEC3F-203ENST00000476513 VILLO15195 856 aa17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 RRP8O43159 456 aaKnown RBP17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 IGHV4-34P06331 123 aa17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 C21orf59P57076 290 aa17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 DLG4P78352 724 aa17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 ZBTB16Q05516 673 aa17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 TARDBPQ13148 414 aaKnown RBP eCLIP17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 DNAJC3Q13217 504 aa17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 RTP5Q14D33 572 aa17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 PRAMEF14Q5SWL7 426 aa17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 FAM217AQ8IXS0 508 aa17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 CYB5D2Q8WUJ1 264 aa17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 ACE2Q9BYF1 805 aaPredicted RBP17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 NRSN2Q9GZP1 204 aa17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 CUEDC2Q9H467 287 aa17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 SGK2Q9HBY8 427 aa17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 PRSS16Q9NQE7 514 aa17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 TFIP11Q9UBB9 837 aaKnown RBP17.22■□□□□ 0.35
APOBEC3F-203ENST00000476513 MUC22E2RYF6 1773 aaPredicted RBP17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 RFPL3O75679 317 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 KIF20AO95235 890 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 LDOC1O95751 146 aaPredicted RBP17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 ASS1P00966 412 aaKnown RBP17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 DNTTP04053 509 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 RPN1P04843 607 aaKnown RBP17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 C1SP09871 688 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 CDK4P11802 303 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 TRIM21P19474 475 aaKnown RBP17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 HOXD9P28356 352 aaPredicted RBP17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 HLA-FP30511 346 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 RACK1P63244 317 aaKnown RBP17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 INCA1Q0VD86 236 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 KNOP1Q1ED39 458 aaKnown RBP17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 ZACNQ401N2 412 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 HES3Q5TGS1 186 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 UNC13DQ70J99 1090 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 SNIP1Q8TAD8 396 aaKnown RBP17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 TAF4BQ92750 862 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 DHX58Q96C10 678 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 CNDP2Q96KP4 475 aaKnown RBP17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 ELF4Q99607 663 aaPredicted RBP17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 C7orf25Q9BPX7 421 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 FBRSQ9HAH7 460 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 SLC39A2Q9NP94 309 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 MARCH2Q9P0N8 246 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 PLA2G4CQ9UP65 541 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 CFAP46Q8IYW2 2715 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 KALRNO60229 2985 aa17.21■□□□□ 0.35
APOBEC3F-203ENST00000476513 SLC12A8A0AV02 714 aa17.2■□□□□ 0.34
APOBEC3F-203ENST00000476513 PDCP20941 246 aa17.2■□□□□ 0.34
APOBEC3F-203ENST00000476513 ACADVLP49748 655 aa17.2■□□□□ 0.34
APOBEC3F-203ENST00000476513 SHBQ15464 509 aa17.2■□□□□ 0.34
APOBEC3F-203ENST00000476513 KIAA0895LQ68EN5 471 aa17.2■□□□□ 0.34
APOBEC3F-203ENST00000476513 PCSK4Q6UW60 755 aa17.2■□□□□ 0.34
APOBEC3F-203ENST00000476513 GPR155Q7Z3F1 870 aa17.2■□□□□ 0.34
APOBEC3F-203ENST00000476513 ADIPOR2Q86V24 386 aa17.2■□□□□ 0.34
APOBEC3F-203ENST00000476513 WFIKKN2Q8TEU8 576 aa17.2■□□□□ 0.34
APOBEC3F-203ENST00000476513 BAP1Q92560 729 aa17.2■□□□□ 0.34
APOBEC3F-203ENST00000476513 SLC6A18Q96N87 628 aa17.2■□□□□ 0.34
APOBEC3F-203ENST00000476513 NT5C1AQ9BXI3 368 aa17.2■□□□□ 0.34
APOBEC3F-203ENST00000476513 DUSP16Q9BY84 665 aa17.2■□□□□ 0.34
APOBEC3F-203ENST00000476513 STRIP2Q9ULQ0 834 aa17.2■□□□□ 0.34
APOBEC3F-203ENST00000476513 MYH10P35580 1976 aa17.2■□□□□ 0.34
APOBEC3F-203ENST00000476513 COL5A1P20908 1838 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms