RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 KRT20P35900 424 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 CCT3P49368 545 aaKnown RBP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 NADK2Q4G0N4 442 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 RNF111Q6ZNA4 994 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 NET1Q7Z628 596 aaPredicted RBP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 SLC25A41Q8N5S1 370 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 GLMNQ92990 594 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 SLC10A4Q96EP9 437 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 RMND5BQ96G75 393 aaPredicted RBP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 MTMR9Q96QG7 549 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 TBCCD1Q9NVR7 557 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 MEGF6O75095 1541 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 MYCP01106 439 aaPredicted RBP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 PDK3Q15120 406 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 STILQ15468 1287 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 INAQ16352 499 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 FAM98CQ17RN3 349 aaKnown RBP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 ZNF362Q5T0B9 420 aaPredicted RBP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 FBXL19Q6PCT2 694 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 ANKMY2Q8IV38 441 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 JADE3Q92613 823 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 CNPY3Q9BT09 278 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 OSBPL8Q9BZF1 889 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 RERGLQ9H628 205 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 TUT1Q9H6E5 874 aaKnown RBP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 LRRC19Q9H756 370 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 KRCC1Q9NPI7 259 aaPredicted RBP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 ARMCX1Q9P291 453 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 VAV3Q9UKW4 847 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 ARAP2Q8WZ64 1704 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 C2orf71A6NGG8 1288 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 PDZK1P1A8MUH7 402 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 KCNN4O15554 427 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 TYROBPO43914 113 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 MFN2O95140 757 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 MED26O95402 600 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 ALDH2P05091 517 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 COMTP21964 271 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 AKAP5P24588 427 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 CHN2P52757 468 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 DYNLL1P63167 89 aaKnown RBP11.81□□□□□ -0.52
U2AF1-209ENST00000475639 ALDH6A1Q02252 535 aaKnown RBP11.81□□□□□ -0.52
U2AF1-209ENST00000475639 SKIV2LQ15477 1246 aaKnown RBP11.81□□□□□ -0.52
U2AF1-209ENST00000475639 TTLL9Q3SXZ7 439 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 LPCAT4Q643R3 524 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 MRPL4Q9BYD3 311 aaKnown RBP11.81□□□□□ -0.52
U2AF1-209ENST00000475639 ADAM33Q9BZ11 813 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 PLEKHA5Q9HAU0 1116 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 KCNK13Q9HB14 408 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 MAN1C1Q9NR34 630 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 SLC7A8Q9UHI5 535 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 COL6A2P12110 1019 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 PSMC3P17980 439 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 RPL5P46777 297 aaKnown RBP11.81□□□□□ -0.52
U2AF1-209ENST00000475639 MTMR1Q13613 665 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 TRMT5Q32P41 509 aaKnown RBP11.81□□□□□ -0.52
U2AF1-209ENST00000475639 TMEM119Q4V9L6 283 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 C11orf63Q6NUN7 778 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 ISLR2Q6UXK2 745 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 TERB1Q8NA31 727 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 UXS1Q8NBZ7 420 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 RNASE11Q8TAA1 199 aaKnown RBP11.81□□□□□ -0.52
U2AF1-209ENST00000475639 SLCO2A1Q92959 643 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 LRRC39Q96DD0 335 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 TELO2Q9Y4R8 837 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 AP1G1O43747 822 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 PEX1O43933 1283 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 ZNF23P17027 643 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 ADORA2BP29275 332 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 HOXA13P31271 388 aaPredicted RBP11.81□□□□□ -0.52
U2AF1-209ENST00000475639 PTK6Q13882 451 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 EDRF1Q3B7T1 1238 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 PLEKHA7Q6IQ23 1121 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 LRRC49Q8IUZ0 686 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 ZNF276Q8N554 614 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.81□□□□□ -0.52
U2AF1-209ENST00000475639 RDM1Q8NG50 284 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 PABPC5Q96DU9 382 aaKnown RBP11.81□□□□□ -0.52
U2AF1-209ENST00000475639 KIFC1Q9BW19 673 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 TRIM39Q9HCM9 518 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 C15orf38-AP3S2A0A0A6YYH1 394 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 SLC16A4O15374 487 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 SLC5A2P31639 672 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 GPC1P35052 558 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 PTPN7P35236 360 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 FXR2P51116 673 aaKnown RBP eCLIP11.81□□□□□ -0.52
U2AF1-209ENST00000475639 POU4F1Q01851 419 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 TRIM25Q14258 630 aaKnown RBP11.81□□□□□ -0.52
U2AF1-209ENST00000475639 TSC22D1Q15714 1073 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 SGO1Q5FBB7 561 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 FRMD5Q7Z6J6 570 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 ARPINQ7Z6K5 226 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 SNX31Q8N9S9 440 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 SHKBP1Q8TBC3 707 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 KLHL3Q9UH77 587 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 VPS9D1Q9Y2B5 631 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 V9GYQ6 96 aa11.81□□□□□ -0.52
U2AF1-209ENST00000475639 PNMA8CA0A1B0GUJ8 204 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 HEATR9A2RTY3 570 aa11.8□□□□□ -0.52
U2AF1-209ENST00000475639 SLC37A4O43826 429 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms