RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 PSMC3IPQ9P2W1 217 aaPredicted RBP15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 PHF24Q9UPV7 400 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 AVILO75366 819 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 METTL18O95568 372 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 GRIK1P39086 918 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 MAGEA6P43360 314 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 APLP1P51693 650 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 DPYSQ14117 519 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 IGDCC3Q8IVU1 814 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 COLGALT2Q8IYK4 626 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 SCML4Q8N228 414 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 FERMT1Q9BQL6 677 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 TRIM62Q9BVG3 475 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 ACSS3Q9H6R3 686 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 TBC1D13Q9NVG8 400 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 FETUBQ9UGM5 382 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 TEX264Q9Y6I9 313 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 STK10O94804 968 aaKnown RBP15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 TPI1P60174 286 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 AP1B1Q10567 949 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 LRRC14Q15048 493 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 PAFAH1B3Q15102 231 aaKnown RBP15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 PDK1Q15118 436 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 TRABD2AQ86V40 505 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 TAX1BP1Q86VP1 789 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 CCNYQ8ND76 341 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 SCAMP5Q8TAC9 235 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 ZNF296Q8WUU4 475 aaPredicted RBP15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 ANLNQ9NQW6 1124 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 NKIRAS1Q9NYS0 192 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 PRG3Q9Y2Y8 225 aaPredicted RBP15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 SF3B1O75533 1304 aaKnown RBP eCLIP15.87■□□□□ 0.131e-6■■■■■ 66.8
RPUSD3-215ENST00000475470 FAM72CH0Y354 149 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 VAV1P15498 845 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 YWHAGP61981 247 aaKnown RBP eCLIP15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 IFRD2Q12894 506 aaPredicted RBP15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 RASA2Q15283 850 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 PKN2Q16513 984 aaKnown RBP15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 FAM72AQ5TYM5 149 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 FAM72DQ6L9T8 149 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 PDZD4Q76G19 769 aaPredicted RBP15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 FAM72BQ86X60 149 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 NETO2Q8NC67 525 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 RNF34Q969K3 372 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 CCDC134Q9H6E4 229 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 TMEM161AQ9NX61 479 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 NR2E3Q9Y5X4 410 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 BRCA2P51587 3418 aa15.87■□□□□ 0.13
RPUSD3-215ENST00000475470 TMEM189-UBE2V1I3L0A0 370 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 PPP1R12AO14974 1030 aaPredicted RBP15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 OR4Q2P0C623 313 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 ERCC2P18074 760 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 CXCR3P49682 368 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 VEGFBP49765 207 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 PRMT2P55345 433 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 EFTUD2Q15029 972 aaKnown RBP eCLIP15.86■□□□□ 0.132e-6■■■□□ 17.1
RPUSD3-215ENST00000475470 SLC39A12Q504Y0 691 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 ANKRD20A2Q5SQ80 823 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 ANKRD20A1Q5TYW2 823 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 ANKRD20A3Q5VUR7 823 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 ABI1Q8IZP0 508 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 MCUQ8NE86 351 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 ZNF317Q96PQ6 595 aaPredicted RBP15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 TKTL2Q9H0I9 626 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 DNAJB4Q9UDY4 337 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 A0A0A0MRY4 1105 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 I6L893 689 aaPredicted RBP15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 DCLK1O15075 740 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 TADA2AO75478 443 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 SPAG6O75602 509 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 DRD4P21917 467 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 MSH2P43246 934 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 HCAR3P49019 387 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 BFSP2Q13515 415 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 PRKD1Q15139 912 aaPredicted RBP15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 QPCTQ16769 361 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 DENND5BQ6ZUT9 1274 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 MICALCLQ6ZW33 695 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 TAC4Q86UU9 113 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 CAND1Q86VP6 1230 aaKnown RBP15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 SPATS2Q86XZ4 545 aaKnown RBP15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 P2RY11Q96G91 374 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 SPATA13Q96N96 652 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 CYTH2Q99418 400 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 PAFAH2Q99487 392 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 TRABDQ9H4I3 376 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 MLXIPLQ9NP71 852 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 SENP1Q9P0U3 644 aa15.86■□□□□ 0.13
RPUSD3-215ENST00000475470 ZNF638Q14966 1978 aaKnown RBP15.85■□□□□ 0.13
RPUSD3-215ENST00000475470 AMHP03971 560 aa15.85■□□□□ 0.13
RPUSD3-215ENST00000475470 VIMP08670 466 aaKnown RBP15.85■□□□□ 0.13
RPUSD3-215ENST00000475470 COL6A1P12109 1028 aa15.85■□□□□ 0.13
RPUSD3-215ENST00000475470 TPSB2P20231 275 aa15.85■□□□□ 0.13
RPUSD3-215ENST00000475470 GLUD2P49448 558 aa15.85■□□□□ 0.13
RPUSD3-215ENST00000475470 SLC5A3P53794 718 aa15.85■□□□□ 0.13
RPUSD3-215ENST00000475470 CBLBQ13191 982 aa15.85■□□□□ 0.13
RPUSD3-215ENST00000475470 SEMA3BQ13214 749 aa15.85■□□□□ 0.13
RPUSD3-215ENST00000475470 MPP2Q14168 576 aa15.85■□□□□ 0.13
RPUSD3-215ENST00000475470 TPSAB1Q15661 275 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms