RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 OR2T3Q8NH03 318 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 C1orf216Q8TAB5 229 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 BACH2Q9BYV9 841 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 SLC2A11Q9BYW1 496 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 ANKRD6Q9Y2G4 727 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 USP3Q9Y6I4 520 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 SLCO1B1Q9Y6L6 691 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 GOLGA4Q13439 2230 aaKnown RBP21.43■■□□□ 1.02
VPS36-203ENST00000475375 KNL1Q8NG31 2342 aa21.43■■□□□ 1.02
VPS36-203ENST00000475375 ACSL1P33121 698 aa21.42■■□□□ 1.02
VPS36-203ENST00000475375 ME1P48163 572 aa21.42■■□□□ 1.02
VPS36-203ENST00000475375 FOXD4L5Q5VV16 416 aaPredicted RBP21.42■■□□□ 1.02
VPS36-203ENST00000475375 ARHGAP18Q8N392 663 aa21.42■■□□□ 1.02
VPS36-203ENST00000475375 CPXM2Q8N436 756 aa21.42■■□□□ 1.02
VPS36-203ENST00000475375 KIAA0895Q8NCT3 520 aa21.42■■□□□ 1.02
VPS36-203ENST00000475375 FOXD4L4Q8WXT5 416 aaPredicted RBP21.42■■□□□ 1.02
VPS36-203ENST00000475375 HEXIM2Q96MH2 286 aaKnown RBP21.42■■□□□ 1.02
VPS36-203ENST00000475375 BBC3Q96PG8 261 aaPredicted RBP21.42■■□□□ 1.02
VPS36-203ENST00000475375 NIF3L1Q9GZT8 377 aa21.42■■□□□ 1.02
VPS36-203ENST00000475375 MMRN2Q9H8L6 949 aa21.42■■□□□ 1.02
VPS36-203ENST00000475375 APOBEC3GQ9HC16 384 aaKnown RBP21.42■■□□□ 1.02
VPS36-203ENST00000475375 TM9SF3Q9HD45 589 aa21.42■■□□□ 1.02
VPS36-203ENST00000475375 PDXKO00764 312 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 KCNK3O14649 394 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 TNFSF14O43557 240 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 TSPAN3O60637 253 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 FSBPO95073 299 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 GRK6P43250 576 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 GCLMP48507 274 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 VAMP7P51809 220 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 YWHAGP61981 247 aaKnown RBP eCLIP21.41■■□□□ 1.02
VPS36-203ENST00000475375 TMEM215Q68D42 235 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 LAYNQ6UX15 382 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 ADAT2Q7Z6V5 191 aaKnown RBP21.41■■□□□ 1.02
VPS36-203ENST00000475375 ZNF366Q8N895 744 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 CCDC150Q8NCX0 1101 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 CYB5D2Q8WUJ1 264 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 ARID3AQ99856 593 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 KCTD10Q9H3F6 313 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 PLA2G4CQ9UP65 541 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.41■■□□□ 1.02
VPS36-203ENST00000475375 BPTFQ12830 3046 aa21.41■■□□□ 1.02
VPS36-203ENST00000475375 DKK1O94907 266 aa21.4■■□□□ 1.02
VPS36-203ENST00000475375 SEMA4FO95754 770 aa21.4■■□□□ 1.02
VPS36-203ENST00000475375 TRIM49P0CI25 452 aa21.4■■□□□ 1.02
VPS36-203ENST00000475375 TRIM49CP0CI26 452 aa21.4■■□□□ 1.02
VPS36-203ENST00000475375 GRIA4P48058 902 aa21.4■■□□□ 1.02
VPS36-203ENST00000475375 CCT8P50990 548 aa21.4■■□□□ 1.02
VPS36-203ENST00000475375 CAMK2GQ13555 558 aaPredicted RBP21.4■■□□□ 1.02
VPS36-203ENST00000475375 MPPE1Q53F39 396 aa21.4■■□□□ 1.02
VPS36-203ENST00000475375 C1orf220Q5T0J3 134 aa21.4■■□□□ 1.02
VPS36-203ENST00000475375 RBBP8NLQ8NC74 664 aaPredicted RBP21.4■■□□□ 1.02
VPS36-203ENST00000475375 TAS1R2Q8TE23 839 aa21.4■■□□□ 1.02
VPS36-203ENST00000475375 PLD4Q96BZ4 506 aa21.4■■□□□ 1.02
VPS36-203ENST00000475375 DCBLD2Q96PD2 775 aa21.4■■□□□ 1.02
VPS36-203ENST00000475375 BTBD1Q9H0C5 482 aa21.4■■□□□ 1.02
VPS36-203ENST00000475375 CABIN1Q9Y6J0 2220 aa21.39■■□□□ 1.01
VPS36-203ENST00000475375 KLRC4O43908 158 aa21.39■■□□□ 1.01
VPS36-203ENST00000475375 DNTTP04053 509 aa21.39■■□□□ 1.01
VPS36-203ENST00000475375 PDIA4P13667 645 aaKnown RBP21.39■■□□□ 1.01
VPS36-203ENST00000475375 HARS2P49590 506 aaKnown RBP21.39■■□□□ 1.01
VPS36-203ENST00000475375 IL9RQ01113 521 aa21.39■■□□□ 1.01
VPS36-203ENST00000475375 INAVAQ3KP66 663 aa21.39■■□□□ 1.01
VPS36-203ENST00000475375 KMT5BQ4FZB7 885 aa21.39■■□□□ 1.01
VPS36-203ENST00000475375 DHRS13Q6UX07 377 aa21.39■■□□□ 1.01
VPS36-203ENST00000475375 PDCD7Q8N8D1 485 aaKnown RBP21.39■■□□□ 1.01
VPS36-203ENST00000475375 TMEM174Q8WUU8 243 aa21.39■■□□□ 1.01
VPS36-203ENST00000475375 IGSF8Q969P0 613 aa21.39■■□□□ 1.01
VPS36-203ENST00000475375 BIRC7Q96CA5 298 aa21.39■■□□□ 1.01
VPS36-203ENST00000475375 FTSJ1Q9UET6 329 aa21.39■■□□□ 1.01
VPS36-203ENST00000475375 SERTAD1Q9UHV2 236 aa21.39■■□□□ 1.01
VPS36-203ENST00000475375 CKAP5Q14008 2032 aa21.39■■□□□ 1.01
VPS36-203ENST00000475375 NUMA1Q14980 2115 aa21.38■■□□□ 1.01
VPS36-203ENST00000475375 H0Y8X5 98 aa21.38■■□□□ 1.01
VPS36-203ENST00000475375 CALUO43852 315 aaPredicted RBP21.38■■□□□ 1.01
VPS36-203ENST00000475375 KRT13P13646 458 aa21.38■■□□□ 1.01
VPS36-203ENST00000475375 SLC8A3P57103 927 aa21.38■■□□□ 1.01
VPS36-203ENST00000475375 TTC31Q49AM3 519 aaPredicted RBP21.38■■□□□ 1.01
VPS36-203ENST00000475375 RESP18Q5W5W9 173 aa21.38■■□□□ 1.01
VPS36-203ENST00000475375 CHST9Q7L1S5 443 aa21.38■■□□□ 1.01
VPS36-203ENST00000475375 WFIKKN2Q8TEU8 576 aa21.38■■□□□ 1.01
VPS36-203ENST00000475375 CRELD1Q96HD1 420 aa21.38■■□□□ 1.01
VPS36-203ENST00000475375 ABCB8Q9NUT2 735 aa21.38■■□□□ 1.01
VPS36-203ENST00000475375 PCDHA7Q9UN72 937 aa21.38■■□□□ 1.01
VPS36-203ENST00000475375 ASXL3Q9C0F0 2248 aa21.37■■□□□ 1.01
VPS36-203ENST00000475375 PCDHGA12O60330 932 aa21.37■■□□□ 1.01
VPS36-203ENST00000475375 SLFN14P0C7P3 912 aa21.37■■□□□ 1.01
VPS36-203ENST00000475375 CD27P26842 260 aa21.37■■□□□ 1.01
VPS36-203ENST00000475375 HOXD9P28356 352 aaPredicted RBP21.37■■□□□ 1.01
VPS36-203ENST00000475375 BCAT1P54687 386 aa21.37■■□□□ 1.01
VPS36-203ENST00000475375 C21orf59P57076 290 aa21.37■■□□□ 1.01
VPS36-203ENST00000475375 PPP3CAQ08209 521 aa21.37■■□□□ 1.01
VPS36-203ENST00000475375 CAMK2BQ13554 666 aa21.37■■□□□ 1.01
VPS36-203ENST00000475375 SMAD1Q15797 465 aaKnown RBP21.37■■□□□ 1.01
VPS36-203ENST00000475375 PIGZQ86VD9 579 aa21.37■■□□□ 1.01
VPS36-203ENST00000475375 FMNL3Q8IVF7 1028 aa21.37■■□□□ 1.01
VPS36-203ENST00000475375 SCUBE3Q8IX30 993 aa21.37■■□□□ 1.01
VPS36-203ENST00000475375 GANCQ8TET4 914 aa21.37■■□□□ 1.01
VPS36-203ENST00000475375 TMEM245Q9H330 911 aa21.37■■□□□ 1.01
VPS36-203ENST00000475375 OSGEPQ9NPF4 335 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms