RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 KLHL2O95198 593 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 ITGAXP20702 1163 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 MSX2P35548 267 aaPredicted RBP16.83■□□□□ 0.28
TPR-205ENST00000474852 ATXN1P54253 815 aaKnown RBP16.83■□□□□ 0.28
TPR-205ENST00000474852 MAP3K10Q02779 954 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 PCLAFQ15004 111 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.83■□□□□ 0.28
TPR-205ENST00000474852 PRAMEF18Q5VWM3 479 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 CES3Q6UWW8 571 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 PPP4R1Q8TF05 950 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 TRAPPC12Q8WVT3 735 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 PGBD4Q96DM1 585 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 AFG3L2Q9Y4W6 797 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 FER1L6Q2WGJ9 1857 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 CCNT2O60583 730 aaKnown RBP16.82■□□□□ 0.28
TPR-205ENST00000474852 TFE3P19532 575 aaPredicted RBP16.82■□□□□ 0.28
TPR-205ENST00000474852 UBA1P22314 1058 aaKnown RBP16.82■□□□□ 0.28
TPR-205ENST00000474852 GABRB2P47870 512 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 ATXN3P54252 364 aaPredicted RBP16.82■□□□□ 0.28
TPR-205ENST00000474852 ITGA9Q13797 1035 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 STXBP2Q15833 593 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 CCDC14Q49A88 953 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 MAP1SQ66K74 1059 aaPredicted RBP16.82■□□□□ 0.28
TPR-205ENST00000474852 TNS4Q8IZW8 715 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 KLHL23Q8NBE8 558 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 RAB3IL1Q8TBN0 382 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 TFB1MQ8WVM0 346 aaKnown RBP16.82■□□□□ 0.28
TPR-205ENST00000474852 OPTNQ96CV9 577 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 NIFKQ9BYG3 293 aaKnown RBP16.82■□□□□ 0.28
TPR-205ENST00000474852 ACAD9Q9H845 621 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 NRBP2Q9NSY0 501 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 INPP5FQ9Y2H2 1132 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 PCDHA11Q9Y5I1 949 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 CCDC160A6NGH7 325 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 CYP3A5P20815 502 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 EFNA5P52803 228 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 SLC10A2Q12908 348 aaPredicted RBP16.82■□□□□ 0.28
TPR-205ENST00000474852 GRM1Q13255 1194 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 ZBTB8OSQ8IWT0 167 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 REPS2Q8NFH8 660 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 MOCOSQ96EN8 888 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 DNAJC1Q96KC8 554 aaKnown RBP16.82■□□□□ 0.28
TPR-205ENST00000474852 TEPSINQ96N21 525 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 SORT1Q99523 831 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 FRMD8Q9BZ67 464 aaPredicted RBP16.82■□□□□ 0.28
TPR-205ENST00000474852 XPNPEP3Q9NQH7 507 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 TRPC5Q9UL62 973 aaPredicted RBP16.82■□□□□ 0.28
TPR-205ENST00000474852 PCDHGB4Q9UN71 923 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 MFHAS1Q9Y4C4 1052 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 PCDHGB5Q9Y5G0 923 aa16.82■□□□□ 0.28
TPR-205ENST00000474852 PLIN3O60664 434 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 CILPO75339 1184 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 TCF7P36402 384 aaPredicted RBP16.81■□□□□ 0.28
TPR-205ENST00000474852 BACE1P56817 501 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 FOLH1Q04609 750 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 ACAP1Q15027 740 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 TARBP2Q15633 366 aaKnown RBP16.81■□□□□ 0.28
TPR-205ENST00000474852 ATF7IP2Q5U623 682 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 NME8Q8N427 588 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 ICA1LQ8NDH6 482 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 BCO2Q9BYV7 579 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 MYOZ2Q9NPC6 264 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 TMEM216Q9P0N5 145 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 TSPAN16Q9UKR8 245 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 SIP14410 1827 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 SF3B1O75533 1304 aaKnown RBP eCLIP16.81■□□□□ 0.288e-7■■■■■ 66.1
TPR-205ENST00000474852 C15orf38-AP3S2A0A0A6YYH1 394 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 APBA3O96018 575 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 L1CAMP32004 1257 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 SERPINB9P50453 376 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 MPZL3Q6UWV2 235 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 ARPINQ7Z6K5 226 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 CMC1Q7Z7K0 106 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 ADGRG6Q86SQ4 1221 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 SCUBE3Q8IX30 993 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 ACTRT2Q8TDY3 377 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 RTP4Q96DX8 246 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 MIS12Q9H081 205 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 DHX35Q9H5Z1 703 aaKnown RBP16.81■□□□□ 0.28
TPR-205ENST00000474852 ZDHHC7Q9NXF8 308 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 SORCS3Q9UPU3 1222 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 COMMD3-BMI1R4GMX3 469 aa16.81■□□□□ 0.28
TPR-205ENST00000474852 MYOCOSA0A1B0GUC4 107 aa16.8■□□□□ 0.28
TPR-205ENST00000474852 BCLAF3A2AJT9 711 aaKnown RBP16.8■□□□□ 0.28
TPR-205ENST00000474852 MAFO75444 373 aaPredicted RBP16.8■□□□□ 0.28
TPR-205ENST00000474852 PABPC4LP0CB38 370 aaKnown RBP16.8■□□□□ 0.28
TPR-205ENST00000474852 TGM2P21980 687 aa16.8■□□□□ 0.28
TPR-205ENST00000474852 CYP2F1P24903 491 aa16.8■□□□□ 0.28
TPR-205ENST00000474852 ABCG1P45844 678 aa16.8■□□□□ 0.28
TPR-205ENST00000474852 PGM2L1Q6PCE3 622 aa16.8■□□□□ 0.28
TPR-205ENST00000474852 KCNT2Q6UVM3 1135 aa16.8■□□□□ 0.28
TPR-205ENST00000474852 NCSTNQ92542 709 aa16.8■□□□□ 0.28
TPR-205ENST00000474852 ATP2A3Q93084 1043 aa16.8■□□□□ 0.28
TPR-205ENST00000474852 LRRC39Q96DD0 335 aa16.8■□□□□ 0.28
TPR-205ENST00000474852 TEX13BQ9BXU2 312 aa16.8■□□□□ 0.28
TPR-205ENST00000474852 B3GNT5Q9BYG0 378 aa16.8■□□□□ 0.28
TPR-205ENST00000474852 RPF1Q9H9Y2 349 aaKnown RBP16.8■□□□□ 0.28
TPR-205ENST00000474852 PREBQ9HCU5 417 aa16.8■□□□□ 0.28
TPR-205ENST00000474852 CHCHD3Q9NX63 227 aaKnown RBP16.8■□□□□ 0.28
TPR-205ENST00000474852 GOLGA8QA0A0J9YX86 632 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms