RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	NOTCH4	Q99466	2003 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	PLEKHD1	A6NEE1	506 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	AGPS	O00116	658 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	EXOC5	O00471	708 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	PODXL	O00592	558 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	FYB1	O15117	783 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CNOT3	O75175	753 aa	Known RBP	4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TULP3	O75386	442 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	PDIA3	P30101	505 aa	Known RBP	4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MCM5	P33992	734 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TIRAP	P58753	221 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TRIM14	Q14142	442 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SLC9C1	Q4G0N8	1177 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	C4orf46	Q504U0	113 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	LCE1E	Q5T753	118 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	GORAB	Q5T7V8	394 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	DAB2IP	Q5VWQ8	1189 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ANO7	Q6IWH7	933 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	KIAA0408	Q6ZU52	694 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	RAB11FIP4	Q86YS3	637 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MYLK4	Q86YV6	388 aa	Predicted RBP	4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SMC5	Q8IY18	1101 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	C11orf44	Q8N8P7	122 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	IPO4	Q8TEX9	1081 aa	Known RBP	4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	WIPF2	Q8TF74	440 aa	Predicted RBP	4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CTAGE1	Q96RT6	745 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TRMO	Q9BU70	441 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	EIF2A	Q9BY44	585 aa	Known RBP	4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TRIM5	Q9C035	493 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	FAM83D	Q9H4H8	585 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	RGL1	Q9NZL6	768 aa		4.18	□□□□□ -1.74
TMEM50B-208	ENST00000474272	AQP7P3	A6NL99	342 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CD3EAP	O15446	510 aa	Known RBP	4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	EGR1	P18146	543 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MST1	P26927	711 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	EPHA3	P29320	983 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MTHFS	P49914	203 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	GALNT1	Q10472	559 aa	Predicted RBP	4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	RAB30	Q15771	203 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MANEAL	Q5VSG8	457 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	RAP1GAP2	Q684P5	730 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	VSTM1	Q6UX27	236 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	USP49	Q70CQ1	688 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CCDC28A	Q8IWP9	274 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MMP21	Q8N119	569 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	METTL25	Q8N6Q8	603 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ZNF527	Q8NB42	609 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ASB5	Q8WWX0	329 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MUL1	Q969V5	352 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.17	□□□□□ -1.74	2e-7	■□□□□ 9.3
TMEM50B-208	ENST00000474272	USP29	Q9HBJ7	922 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	VPS51	Q9UID3	782 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	HPSE	Q9Y251	543 aa		4.17	□□□□□ -1.74
TMEM50B-208	ENST00000474272	AQP12B	A6NM10	295 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	HNRNPDL	O14979	420 aa	Known RBP	4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	FFAR2	O15552	330 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TMPRSS11D	O60235	418 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	NBN	O60934	754 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	FGF2	P09038	288 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	AR	P10275	920 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ATIC	P31939	592 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CFHR3	Q02985	330 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	DHX8	Q14562	1220 aa	Known RBP	4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	KPNB1	Q14974	876 aa	Known RBP	4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	PUM3	Q15397	648 aa	Known RBP	4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SLC5A9	Q2M3M2	681 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ARHGAP15	Q53QZ3	475 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	DENND2C	Q68D51	928 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	GGT6	Q6P531	493 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CCDC174	Q6PII3	467 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	FBXO38	Q6PIJ6	1188 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	USP17L6P	Q6QN14	398 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ZNF793	Q6ZN11	406 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	C12orf76	Q8N812	135 aa	Predicted RBP	4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	CCDC150	Q8NCX0	1101 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SLC25A28	Q96A46	364 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	EDC3	Q96F86	508 aa	Known RBP	4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	KAZALD1	Q96I82	304 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SNX27	Q96L92	541 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	ZPBP	Q9BS86	351 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TM2D2	Q9BX73	214 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	PCDHAC1	Q9H158	963 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MYH16	Q9H6N6	1097 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	PPCS	Q9HAB8	311 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MLXIPL	Q9NP71	852 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	NECTIN3	Q9NQS3	549 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	TM7SF3	Q9NS93	570 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	IGSF9	Q9P2J2	1179 aa		4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.16	□□□□□ -1.74
TMEM50B-208	ENST00000474272	LOC102724159	A0A0B4J2E5	919 aa		4.15	□□□□□ -1.75
TMEM50B-208	ENST00000474272	IGLV5-39	A0A0G2JS06	123 aa		4.15	□□□□□ -1.75
TMEM50B-208	ENST00000474272	GOLGA6L3	A6NEY3	463 aa		4.15	□□□□□ -1.75
TMEM50B-208	ENST00000474272	LGALS16	A8MUM7	142 aa		4.15	□□□□□ -1.75
TMEM50B-208	ENST00000474272	PRSS44	E7EML9	344 aa		4.15	□□□□□ -1.75
TMEM50B-208	ENST00000474272		M0R3H8	397 aa		4.15	□□□□□ -1.75
TMEM50B-208	ENST00000474272	RRH	O14718	337 aa		4.15	□□□□□ -1.75
TMEM50B-208	ENST00000474272	NPC1	O15118	1278 aa		4.15	□□□□□ -1.75

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