RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 KRT31Q15323 416 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 CCDC6Q16204 474 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 FAM133BQ5BKY9 247 aaKnown RBP18.67■□□□□ 0.58
UPF3A-203ENST00000474056 ADGRF1Q5T601 910 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 SMYD5Q6GMV2 418 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 SASS6Q6UVJ0 657 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 ANKS1BQ7Z6G8 1248 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 TAC4Q86UU9 113 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 UNC45BQ8IWX7 931 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 FAM71AQ8IYT1 594 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 ADAM32Q8TC27 787 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 RLN3Q8WXF3 142 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 SERPINB11Q96P15 392 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 GABRG3Q99928 467 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 VPS16Q9H269 839 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 POPDC2Q9HBU9 364 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 CACNA2D2Q9NY47 1150 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 RAD54BQ9Y620 910 aa18.67■□□□□ 0.58
UPF3A-203ENST00000474056 WASH3PC4AMC7 463 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 CAPN9O14815 690 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 ACSL4O60488 711 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 UCHL3P15374 230 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 GABRG2P18507 467 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 SLC6A4P31645 630 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 PITX1P78337 314 aaPredicted RBP18.66■□□□□ 0.58
UPF3A-203ENST00000474056 TAF5Q15542 800 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 CSRP2Q16527 193 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 STX1AQ16623 288 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 RSPO4Q2I0M5 234 aaPredicted RBP18.66■□□□□ 0.58
UPF3A-203ENST00000474056 CCDC183Q5T5S1 534 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 PMS2CLQ68D20 193 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 KIAA1211LQ6NV74 962 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 RFWD3Q6PCD5 774 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 PRR23CQ6ZRP0 262 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 BEND5Q7L4P6 421 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 PGBD3Q8N328 593 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 FRMD1Q8N878 549 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 SLC39A13Q96H72 371 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 PPP1R13BQ96KQ4 1090 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 NAA15Q9BXJ9 866 aaKnown RBP18.66■□□□□ 0.58
UPF3A-203ENST00000474056 LHX5Q9H2C1 402 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 CD248Q9HCU0 757 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 PLCB1Q9NQ66 1216 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 ANO10Q9NW15 660 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 FANCLQ9NW38 375 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 TLR6Q9Y2C9 796 aa18.66■□□□□ 0.58
UPF3A-203ENST00000474056 KRT9P35527 623 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 P2RY2P41231 377 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 KLK7P49862 253 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 ZNF445P59923 1031 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 LMNB2Q03252 620 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 NNTQ13423 1086 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 ELF2Q15723 593 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 PTPN20Q4JDL3 420 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 PIK3R6Q5UE93 754 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 TMEM215Q68D42 235 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 NADSYN1Q6IA69 706 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 SDE2Q6IQ49 451 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 FAM183BPQ6ZVS7 135 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 WFDC5Q8TCV5 224 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 IPO4Q8TEX9 1081 aaKnown RBP18.65■□□□□ 0.58
UPF3A-203ENST00000474056 TMA16Q96EY4 203 aaKnown RBP18.65■□□□□ 0.58
UPF3A-203ENST00000474056 SLC2A11Q9BYW1 496 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 SMOC1Q9H4F8 434 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 TMEM63CQ9P1W3 806 aa18.65■□□□□ 0.58
UPF3A-203ENST00000474056 THAP10Q9P2Z0 257 aaPredicted RBP18.65■□□□□ 0.58
UPF3A-203ENST00000474056 IRAK2O43187 625 aa18.64■□□□□ 0.57
UPF3A-203ENST00000474056 RHOBTB1O94844 696 aa18.64■□□□□ 0.57
UPF3A-203ENST00000474056 TRUB2O95900 331 aaKnown RBP18.64■□□□□ 0.57
UPF3A-203ENST00000474056 MOCS2O96007 188 aaPredicted RBP18.64■□□□□ 0.57
UPF3A-203ENST00000474056 ERBB2P04626 1255 aa18.64■□□□□ 0.57
UPF3A-203ENST00000474056 NDUFV2P19404 249 aa18.64■□□□□ 0.57
UPF3A-203ENST00000474056 HLA-FP30511 346 aa18.64■□□□□ 0.57
UPF3A-203ENST00000474056 IL12RB1P42701 662 aa18.64■□□□□ 0.57
UPF3A-203ENST00000474056 SLC11A2P49281 568 aa18.64■□□□□ 0.57
UPF3A-203ENST00000474056 YWHAZP63104 245 aaKnown RBP18.64■□□□□ 0.57
UPF3A-203ENST00000474056 OR6B2Q6IFH4 312 aa18.64■□□□□ 0.57
UPF3A-203ENST00000474056 UCMAQ8WVF2 138 aa18.64■□□□□ 0.57
UPF3A-203ENST00000474056 AZIN2Q96A70 460 aa18.64■□□□□ 0.57
UPF3A-203ENST00000474056 PRICKLE1Q96MT3 831 aaPredicted RBP18.64■□□□□ 0.57
UPF3A-203ENST00000474056 TRIM62Q9BVG3 475 aa18.64■□□□□ 0.57
UPF3A-203ENST00000474056 NUCKS1Q9H1E3 243 aaKnown RBP18.64■□□□□ 0.57
UPF3A-203ENST00000474056 GANQ9H2C0 597 aa18.64■□□□□ 0.57
UPF3A-203ENST00000474056 XPO7Q9UIA9 1087 aaKnown RBP18.64■□□□□ 0.57
UPF3A-203ENST00000474056 NYNRINQ9P2P1 1898 aaKnown RBP18.63■□□□□ 0.57
UPF3A-203ENST00000474056 PRR5-ARHGAP8B1AHC4 643 aa18.63■□□□□ 0.57
UPF3A-203ENST00000474056 TBL1XO60907 577 aa18.63■□□□□ 0.57
UPF3A-203ENST00000474056 GRAP2O75791 330 aa18.63■□□□□ 0.57
UPF3A-203ENST00000474056 IGLV3-25P01717 112 aa18.63■□□□□ 0.57
UPF3A-203ENST00000474056 CYP11B1P15538 503 aa18.63■□□□□ 0.57
UPF3A-203ENST00000474056 MPLP40238 635 aa18.63■□□□□ 0.57
UPF3A-203ENST00000474056 BPIFB4P59827 614 aa18.63■□□□□ 0.57
UPF3A-203ENST00000474056 ARHGAP8P85298 464 aa18.63■□□□□ 0.57
UPF3A-203ENST00000474056 MYL5Q02045 173 aa18.63■□□□□ 0.57
UPF3A-203ENST00000474056 ZNF234Q14588 700 aa18.63■□□□□ 0.57
UPF3A-203ENST00000474056 EIF4HQ15056 248 aaKnown RBP18.63■□□□□ 0.57
UPF3A-203ENST00000474056 MAP7D1Q3KQU3 841 aa18.63■□□□□ 0.57
UPF3A-203ENST00000474056 TAF3Q5VWG9 929 aa18.63■□□□□ 0.57
UPF3A-203ENST00000474056 RNF43Q68DV7 783 aa18.63■□□□□ 0.57
UPF3A-203ENST00000474056 OLFML1Q6UWY5 402 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms