RNA–Protein interactions for RNA: ENST00000473820.1

PPP2R1A-208, Transcript of protein phosphatase 2 scaffold subunit Aalpha, human

TSL 2

Gene PPP2R1A, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP2R1A-208	ENST00000473820	NLRC4	Q9NPP4	1024 aa		10.46	□□□□□ -0.73
PPP2R1A-208	ENST00000473820	EHD2	Q9NZN4	543 aa		10.46	□□□□□ -0.73
PPP2R1A-208	ENST00000473820	GCNT4	Q9P109	453 aa		10.46	□□□□□ -0.73
PPP2R1A-208	ENST00000473820	UXT	Q9UBK9	157 aa	Predicted RBP	10.46	□□□□□ -0.73
PPP2R1A-208	ENST00000473820	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.46	□□□□□ -0.73
PPP2R1A-208	ENST00000473820	ZMYM5	Q9UJ78	669 aa		10.46	□□□□□ -0.73
PPP2R1A-208	ENST00000473820	PCDHB4	Q9Y5E5	795 aa		10.46	□□□□□ -0.73
PPP2R1A-208	ENST00000473820		A0A0A6YYK5	440 aa	Predicted RBP	10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	LNP1	A1A4G5	178 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	CES2	O00748	559 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	CD19	P15391	556 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	CSRP1	P21291	193 aa	Known RBP	10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	WEE1	P30291	646 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	DHPS	P49366	369 aa	Predicted RBP	10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	JAM2	P57087	298 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	DMC1	Q14565	340 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	TEX35	Q5T0J7	233 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	KIAA1211L	Q6NV74	962 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	FBXO38	Q6PIJ6	1188 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	SYT13	Q7L8C5	426 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	IRF2BP2	Q7Z5L9	587 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	DEFB124	Q8NES8	71 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	TSTD1	Q8NFU3	115 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	CCDC26	Q8TAB7	109 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	SCAMP5	Q8TAC9	235 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	PIGK	Q92643	395 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	ACD	Q96AP0	544 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	TRMT2B	Q96GJ1	504 aa	Known RBP	10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	CEP295NL	Q96MC4	621 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	CYP2S1	Q96SQ9	504 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	FAM83C	Q9BQN1	747 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	LACRT	Q9GZZ8	138 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	TRPM5	Q9NZQ8	1165 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	RAB21	Q9UL25	225 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	SNX12	Q9UMY4	172 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	HYOU1	Q9Y4L1	999 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	LAMA1	P25391	3075 aa		10.45	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	KIF26A	Q9ULI4	1882 aa	Predicted RBP	10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	MAP3K13	O43283	966 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	RTN3	O95197	1032 aa	Predicted RBP	10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	KRT5	P13647	590 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	ACO1	P21399	889 aa	Known RBP	10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	YWHAQ	P27348	245 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	SOX5	P35711	763 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	PAFAH1B1	P43034	410 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	APBA1	Q02410	837 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	GCNT1	Q02742	428 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	TAF10	Q12962	218 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	PDGFRL	Q15198	375 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	ARHGAP44	Q17R89	818 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	MAP9	Q49MG5	647 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	SGO2	Q562F6	1265 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	DPY19L2P1	Q6NXN4	242 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	WDR93	Q6P2C0	686 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	GJB7	Q6PEY0	223 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	CYP2U1	Q7Z449	544 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	MON1A	Q86VX9	555 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	SYCE1	Q8N0S2	351 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	CPA6	Q8N4T0	437 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	CHFR	Q96EP1	664 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	SLITRK1	Q96PX8	696 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	DUSP16	Q9BY84	665 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	FAM124B	Q9H5Z6	455 aa	Predicted RBP	10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	CSNK1G1	Q9HCP0	422 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	HPS4	Q9NQG7	708 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	TDP1	Q9NUW8	608 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	APEX2	Q9UBZ4	518 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	EBF1	Q9UH73	591 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	TSC2	P49815	1807 aa		10.44	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	ABCA7	Q8IZY2	2146 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	ZZEF1	O43149	2961 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	MACROD2	A1Z1Q3	448 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	GRID2IP	A4D2P6	1211 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	C2orf78	A6NCI8	922 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	ZNF840P	A6NDX5	716 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	OTOL1	A6NHN0	477 aa	Predicted RBP	10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	PATE3	B3GLJ2	98 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	TNFRSF10B	O14763	440 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	HYAL3	O43820	417 aa	Predicted RBP	10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	CALCA	P01258	141 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	CKM	P06732	381 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	PLEK	P08567	350 aa	Predicted RBP	10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	ARSA	P15289	507 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	HDC	P19113	662 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	DDX6	P26196	483 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	GJA4	P35212	333 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	USP8	P40818	1118 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	MAPK8	P45983	427 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	SLC5A3	P53794	718 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	ATXN3	P54252	364 aa	Predicted RBP	10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	MFAP3	P55082	362 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	SLC8A3	P57103	927 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	IRX4	P78413	519 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	GFPT1	Q06210	699 aa	Predicted RBP	10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	LMAN2	Q12907	356 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	NR1H3	Q13133	447 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	GPS2	Q13227	327 aa		10.43	□□□□□ -0.74
PPP2R1A-208	ENST00000473820	GOLGA7B	Q2TAP0	167 aa		10.43	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms