RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 LTBP3Q9NS15 1303 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 WDR27A2RRH5 827 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 GCATO75600 419 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 LUC7L3O95232 432 aaKnown RBP11.3□□□□□ -0.6
C9orf3-214ENST00000473778 FESP07332 822 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 P4HA1P13674 534 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 CCDC130P13994 396 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 CRHR1P34998 444 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 PGM1P36871 562 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 SLC26A2P50443 739 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 ALDH18A1P54886 795 aaKnown RBP11.3□□□□□ -0.6
C9orf3-214ENST00000473778 PITX1P78337 314 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-214ENST00000473778 RBP5P82980 135 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 TUBB3Q13509 450 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 OLIG2Q13516 323 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 DPYSL2Q16555 572 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 MUM1Q2TAK8 710 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 CMPK2Q5EBM0 449 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 GLRA4Q5JXX5 417 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 NCBP2-AS2Q69YL0 99 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 LRRC74BQ6ZQY2 392 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 IFNLR1Q8IU57 520 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-214ENST00000473778 TP53INP2Q8IXH6 220 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 EXOC8Q8IYI6 725 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 PHC3Q8NDX5 983 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 NDRG1Q92597 394 aaKnown RBP11.3□□□□□ -0.6
C9orf3-214ENST00000473778 USP6NLQ92738 828 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 C18orf25Q96B23 403 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-214ENST00000473778 FAM161BQ96MY7 647 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 CSPG4P5Q96PW8 444 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 PANX3Q96QZ0 392 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 MKS1Q9NXB0 559 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 C2CD2Q9Y426 696 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 USP3Q9Y6I4 520 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 RPS6KL1Q9Y6S9 549 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 I3L4J1 428 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 ADCY6O43306 1168 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 GOT1P17174 413 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 VHLP40337 213 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 TBC1D25Q3MII6 688 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 ZNF618Q5T7W0 954 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 SLC30A9Q6PML9 568 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 MAVSQ7Z434 540 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 ARNTL2Q8WYA1 636 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 TBCBQ99426 244 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 MMADHCQ9H3L0 296 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-214ENST00000473778 STOML1Q9UBI4 398 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 SLC7A8Q9UHI5 535 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 AP4E1Q9UPM8 1137 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 PCDHA11Q9Y5I1 949 aa11.3□□□□□ -0.6
C9orf3-214ENST00000473778 MEI4A8MW99 385 aa11.29□□□□□ -0.6
C9orf3-214ENST00000473778 SORBS2O94875 1100 aaKnown RBP11.29□□□□□ -0.6
C9orf3-214ENST00000473778 LMO2P25791 158 aa11.29□□□□□ -0.6
C9orf3-214ENST00000473778 RPL10AP62906 217 aaKnown RBP11.29□□□□□ -0.6
C9orf3-214ENST00000473778 TNFAIP2Q03169 654 aa11.29□□□□□ -0.6
C9orf3-214ENST00000473778 SLC34A1Q06495 639 aa11.29□□□□□ -0.6
C9orf3-214ENST00000473778 MARCH8Q5T0T0 291 aa11.29□□□□□ -0.6
C9orf3-214ENST00000473778 SLC25A41Q8N5S1 370 aa11.29□□□□□ -0.6
C9orf3-214ENST00000473778 PDCD7Q8N8D1 485 aaKnown RBP11.29□□□□□ -0.6
C9orf3-214ENST00000473778 CENPIQ92674 756 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-214ENST00000473778 LRRC39Q96DD0 335 aa11.29□□□□□ -0.6
C9orf3-214ENST00000473778 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.29□□□□□ -0.6
C9orf3-214ENST00000473778 STX18Q9P2W9 335 aaKnown RBP11.29□□□□□ -0.6
C9orf3-214ENST00000473778 PPP2R3BQ9Y5P8 575 aa11.29□□□□□ -0.6
C9orf3-214ENST00000473778 E2F8A0AVK6 867 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 SDR42E2A6NKP2 422 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 KRT38O76015 456 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 RTN3O95197 1032 aaPredicted RBP11.28□□□□□ -0.6
C9orf3-214ENST00000473778 STAU1O95793 577 aaKnown RBP11.28□□□□□ -0.6
C9orf3-214ENST00000473778 LMNAP02545 664 aaKnown RBP11.28□□□□□ -0.6
C9orf3-214ENST00000473778 FGF3P11487 239 aaPredicted RBP11.28□□□□□ -0.6
C9orf3-214ENST00000473778 TPSB2P20231 275 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 CPOXP36551 454 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 RAP1GDS1P52306 607 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 POU5F1BQ06416 359 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 NIPAL4Q0D2K0 466 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 TMEM62Q0P6H9 643 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 SEMA5AQ13591 1074 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 PDE1CQ14123 709 aaPredicted RBP11.28□□□□□ -0.6
C9orf3-214ENST00000473778 TPSAB1Q15661 275 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 CCDC6Q16204 474 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 MBLAC2Q68D91 279 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 SMYD5Q6GMV2 418 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 KLHL23Q8NBE8 558 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 DEPDC1BQ8WUY9 529 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 NLRP7Q8WX94 980 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 OLFM3Q96PB7 478 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 QKIQ96PU8 341 aaKnown RBP eCLIP11.28□□□□□ -0.6
C9orf3-214ENST00000473778 C16orf70Q9BSU1 422 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 TUBB6Q9BUF5 446 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 FRMD8Q9BZ67 464 aaPredicted RBP11.28□□□□□ -0.6
C9orf3-214ENST00000473778 SNTG2Q9NY99 539 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 TPP1O14773 563 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 MFSD11O43934 449 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 LCP1P13796 627 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 ADORA2BP29275 332 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 HOXA11P31270 313 aaPredicted RBP11.28□□□□□ -0.6
C9orf3-214ENST00000473778 GTF2A2P52657 109 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 KCTD2Q14681 263 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 FASTKD1Q53R41 847 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms