RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 FZD5Q13467 585 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 C2CD6Q53TS8 623 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 MPP7Q5T2T1 576 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 ACBD5Q5T8D3 534 aaPredicted RBP14.76□□□□□ -0.05
BRCA1-211ENST00000472490 FSTL4Q6MZW2 842 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 MON1BQ7L1V2 547 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 ZNF571Q7Z3V5 609 aaPredicted RBP14.76□□□□□ -0.05
BRCA1-211ENST00000472490 C1orf210Q8IVY1 113 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 ETFBKMTQ8IXQ9 262 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 C3orf20Q8ND61 904 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 TMA16Q96EY4 203 aaKnown RBP14.76□□□□□ -0.05
BRCA1-211ENST00000472490 TRIM11Q96F44 468 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 PGAP3Q96FM1 320 aaPredicted RBP14.76□□□□□ -0.05
BRCA1-211ENST00000472490 FCRL2Q96LA5 508 aaPredicted RBP14.76□□□□□ -0.05
BRCA1-211ENST00000472490 SYT11Q9BT88 431 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 RBSNQ9H1K0 784 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 ARHGEF4Q9NR80 690 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 DNAJC17Q9NVM6 304 aaKnown RBP14.76□□□□□ -0.05
BRCA1-211ENST00000472490 SPATA6Q9NWH7 488 aaPredicted RBP14.76□□□□□ -0.05
BRCA1-211ENST00000472490 TMEM59LQ9UK28 342 aa14.76□□□□□ -0.05
BRCA1-211ENST00000472490 SYNJ2BP-COX16A0A087WUM0 186 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 LAMTOR5O43504 91 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 TULP3O75386 442 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 KAT7O95251 611 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 PENKP01210 267 aaPredicted RBP14.75□□□□□ -0.05
BRCA1-211ENST00000472490 COL9A1P20849 921 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 SULT1E1P49888 294 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 CCR3P51677 355 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 EIF4EBP2Q13542 120 aaPredicted RBP14.75□□□□□ -0.05
BRCA1-211ENST00000472490 E2F5Q15329 346 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 GAB4Q2WGN9 574 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 ZC3H12AQ5D1E8 599 aaKnown RBP14.75□□□□□ -0.05
BRCA1-211ENST00000472490 BRMS1LQ5PSV4 323 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 DNAJC24Q6P3W2 148 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 SPEM1Q8N4L4 309 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 NAT16Q8N8M0 369 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 OR8K1Q8NGG5 319 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 NT5C3BQ969T7 300 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 NPY6RQ99463 290 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.75□□□□□ -0.05
BRCA1-211ENST00000472490 SLC2A11Q9BYW1 496 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 WDCPQ9H6R7 721 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 METTL5Q9NRN9 209 aaKnown RBP14.75□□□□□ -0.05
BRCA1-211ENST00000472490 COX16Q9P0S2 106 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 COL4A2P08572 1712 aa14.75□□□□□ -0.05
BRCA1-211ENST00000472490 HELZP42694 1942 aaKnown RBP14.74□□□□□ -0.05
BRCA1-211ENST00000472490 A0A0A0MRY4 1105 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 FAM170AA1A519 330 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 TBC1D3BA6NDS4 549 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 SIGLEC16A6NMB1 481 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 KCNU1A8MYU2 1149 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 RTN2O75298 545 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 MOCS2O96007 188 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-211ENST00000472490 EGFP01133 1207 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 MYBL1P10243 752 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 SKILP12757 684 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 PDGFRAP16234 1089 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 SDC4P31431 198 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 HNRNPH3P31942 346 aaKnown RBP14.74□□□□□ -0.05
BRCA1-211ENST00000472490 RDXP35241 583 aaKnown RBP14.74□□□□□ -0.05
BRCA1-211ENST00000472490 TNFRSF4P43489 277 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 DGKGP49619 791 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 PTPN5P54829 565 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 DEUP1Q05D60 604 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 PTP4A2Q12974 167 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 FYB2Q5VWT5 728 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 E4F1Q66K89 784 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-211ENST00000472490 GRAMD4Q6IC98 578 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 CNGA4Q8IV77 575 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 CCDC117Q8IWD4 279 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-211ENST00000472490 MCOLN2Q8IZK6 566 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 KCNV2Q8TDN2 545 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 BHMTQ93088 406 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 FBRSL1Q9HCM7 1045 aaKnown RBP14.74□□□□□ -0.05
BRCA1-211ENST00000472490 PARVAQ9NVD7 372 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 ADAMTS1Q9UHI8 967 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 CUL9Q8IWT3 2517 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 TICRRQ7Z2Z1 1910 aa14.74□□□□□ -0.05
BRCA1-211ENST00000472490 KIF26AQ9ULI4 1882 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-211ENST00000472490 TMCO5BA8MYB1 307 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 DDX3XO00571 662 aaKnown RBP eCLIP14.73□□□□□ -0.05
BRCA1-211ENST00000472490 RNF40O75150 1001 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 FTLP02792 175 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-211ENST00000472490 FLT3P36888 993 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 CXCL12P48061 93 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 SLC6A11P48066 632 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 PITX1P78337 314 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-211ENST00000472490 MRPS21P82921 87 aaKnown RBP14.73□□□□□ -0.05
BRCA1-211ENST00000472490 MTAPQ13126 283 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 ANGPT1Q15389 498 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 HSF5Q4G112 596 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-211ENST00000472490 PIK3R6Q5UE93 754 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 HGSNATQ68CP4 663 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 DCUN1D2Q6PH85 259 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 C12orf40Q86WS4 652 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 TERB1Q8NA31 727 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 HJURPQ8NCD3 748 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-211ENST00000472490 ACDQ96AP0 544 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 CFAP57Q96MR6 1250 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 DNAJC7Q99615 494 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms