RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 ZNF132P52740 706 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 COPAP53621 1224 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 COG7P83436 770 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 ENPP2Q13822 863 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 ZNF234Q14588 700 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 CAMK4Q16566 473 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 PTPRNQ16849 979 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 FAM133BQ5BKY9 247 aaKnown RBP8.44□□□□□ -1.06
USP48-207ENST00000471752 SYPL2Q5VXT5 272 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 LYSMD4Q5XG99 296 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 LCLAT1Q6UWP7 414 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 KIAA1324Q6UXG2 1013 aaKnown RBP8.44□□□□□ -1.06
USP48-207ENST00000471752 RSRC2Q7L4I2 434 aaKnown RBP8.44□□□□□ -1.06
USP48-207ENST00000471752 ADIPOR2Q86V24 386 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 FAM124AQ86V42 546 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 MARCH9Q86YJ5 346 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 SYT12Q8IV01 421 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 SCUBE3Q8IX30 993 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 FAM217AQ8IXS0 508 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 CCDC150Q8NCX0 1101 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 DDI1Q8WTU0 396 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 TOE1Q96GM8 510 aaKnown RBP8.44□□□□□ -1.06
USP48-207ENST00000471752 LMLNQ96KR4 655 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 HSPA12BQ96MM6 686 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 TIGD1Q96MW7 591 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 CRACR2AQ9BSW2 395 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 GTPBP2Q9BX10 602 aaKnown RBP8.44□□□□□ -1.06
USP48-207ENST00000471752 SRRTQ9BXP5 876 aaKnown RBP8.44□□□□□ -1.06
USP48-207ENST00000471752 MIS12Q9H081 205 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 IL21RQ9HBE5 538 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 CAPN10Q9HC96 672 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 TMEM9BQ9NQ34 198 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 ELOVL2Q9NXB9 296 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 NAALADL1Q9UQQ1 740 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 SLC27A6Q9Y2P4 619 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 ATP6V1DQ9Y5K8 247 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 MYH10P35580 1976 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 NUP205Q92621 2012 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 PI4KAP42356 2102 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 SMG1Q96Q15 3661 aaKnown RBP8.43□□□□□ -1.06
USP48-207ENST00000471752 GOLGA6L4A6NEF3 574 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 KCNK3O14649 394 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 SMC2O95347 1197 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 CD59P13987 128 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 SLC9A1P19634 815 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 CTSOP43234 321 aaPredicted RBP8.43□□□□□ -1.06
USP48-207ENST00000471752 PSEN1P49768 467 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 TPMTP51580 245 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 RPS24P62847 133 aaKnown RBP8.43□□□□□ -1.06
USP48-207ENST00000471752 ZNF252P-AS1Q0IIN9 211 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 BST2Q10589 180 aaKnown RBP8.43□□□□□ -1.06
USP48-207ENST00000471752 KCNH2Q12809 1159 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 FOXC1Q12948 553 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 CNGA2Q16280 664 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 CCDC40Q4G0X9 1142 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 HSF5Q4G112 596 aaPredicted RBP8.43□□□□□ -1.06
USP48-207ENST00000471752 FSCBQ5H9T9 825 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 KCNT1Q5JUK3 1230 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 PEAR1Q5VY43 1037 aaPredicted RBP8.43□□□□□ -1.06
USP48-207ENST00000471752 DPY19L2P1Q6NXN4 242 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 SLC23A3Q6PIS1 610 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 LAYNQ6UX15 382 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 PIP4P1Q86T03 277 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 TMPRSS6Q8IU80 811 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 TRIM59Q8IWR1 403 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 CFAP52Q8N1V2 620 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 PPM1KQ8N3J5 372 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 WDTC1Q8N5D0 677 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 CCDC26Q8TAB7 109 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 KCNV2Q8TDN2 545 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 KCTD13Q8WZ19 329 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 ZNF419Q96HQ0 510 aaPredicted RBP8.43□□□□□ -1.06
USP48-207ENST00000471752 DHTKD1Q96HY7 919 aaPredicted RBP8.43□□□□□ -1.06
USP48-207ENST00000471752 TSG101Q99816 390 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 GPR174Q9BXC1 333 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 TMEM121BQ9BXQ6 578 aaPredicted RBP8.43□□□□□ -1.06
USP48-207ENST00000471752 ADAM33Q9BZ11 813 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 CIPCQ9C0C6 399 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 INTS2Q9H0H0 1204 aaKnown RBP8.43□□□□□ -1.06
USP48-207ENST00000471752 CAAP1Q9H8G2 361 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 PRDM16Q9HAZ2 1276 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 LRRC4Q9HBW1 653 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 ITM2CQ9NQX7 267 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 ABCB8Q9NUT2 735 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 RMND1Q9NWS8 449 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 WSB2Q9NYS7 404 aaPredicted RBP8.43□□□□□ -1.06
USP48-207ENST00000471752 STIM2Q9P246 746 aa8.43□□□□□ -1.06
USP48-207ENST00000471752 EVLQ9UI08 416 aaPredicted RBP8.43□□□□□ -1.06
USP48-207ENST00000471752 INTS6Q9UL03 887 aaKnown RBP8.43□□□□□ -1.06
USP48-207ENST00000471752 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.43□□□□□ -1.06
USP48-207ENST00000471752 ADAMTS9Q9P2N4 1935 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 IGSF10Q6WRI0 2623 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 BECN2A8MW95 431 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 M0QYV0 167 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 HYAL3O43820 417 aaPredicted RBP8.42□□□□□ -1.06
USP48-207ENST00000471752 SH3BP5O60239 455 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 STX10O60499 249 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 TBL1XO60907 577 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 GJB3O75712 270 aa8.42□□□□□ -1.06
USP48-207ENST00000471752 EPHX1P07099 455 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms