RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 DEC1Q9P2X7 70 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 SLC12A6Q9UHW9 1150 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 FBXO10Q9UK96 956 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 MYOFQ9NZM1 2061 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 FAM170AA1A519 330 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 M0QYT0 321 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 KAT7O95251 611 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 EGFP01133 1207 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 APODP05090 189 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 TPM1P09493 284 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 SKILP12757 684 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 HNRNPH3P31942 346 aaKnown RBP15.88■□□□□ 0.13
SDC3-203ENST00000471567 CCR1P32246 355 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 GRIA2P42262 883 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 PPP2R5DQ14738 602 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 ZC3H12AQ5D1E8 599 aaKnown RBP15.88■□□□□ 0.13
SDC3-203ENST00000471567 FYB2Q5VWT5 728 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 NUDT18Q6ZVK8 323 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 VPS36Q86VN1 386 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 GAS2L3Q86XJ1 694 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 C1orf210Q8IVY1 113 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 DRC7Q8IY82 874 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 MCOLN2Q8IZK6 566 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 PHTF2Q8N3S3 785 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 SPEM1Q8N4L4 309 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 NAT16Q8N8M0 369 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 ATP6V0D2Q8N8Y2 350 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 C3orf20Q8ND61 904 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 BTN2A3PQ96KV6 586 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 TRIM5Q9C035 493 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 IRF2BPLQ9H1B7 796 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 ARHGEF4Q9NR80 690 aa15.88■□□□□ 0.13
SDC3-203ENST00000471567 SPATA6Q9NWH7 488 aaPredicted RBP15.88■□□□□ 0.13
SDC3-203ENST00000471567 KCNU1A8MYU2 1149 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 DDX3XO00571 662 aaKnown RBP eCLIP15.87■□□□□ 0.13
SDC3-203ENST00000471567 ATG13O75143 517 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 KRT3P12035 628 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 ABCB4P21439 1286 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 FLT3P36888 993 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 TNFRSF4P43489 277 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 SULT1E1P49888 294 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 MTAPQ13126 283 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 ARID5BQ14865 1188 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 TDRD12Q587J7 1177 aaKnown RBP15.87■□□□□ 0.13
SDC3-203ENST00000471567 FAM133BQ5BKY9 247 aaKnown RBP15.87■□□□□ 0.13
SDC3-203ENST00000471567 MPP7Q5T2T1 576 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 GRAMD4Q6IC98 578 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 SND1Q7KZF4 910 aaKnown RBP eCLIP15.87■□□□□ 0.13
SDC3-203ENST00000471567 OR8K1Q8NGG5 319 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 DDI1Q8WTU0 396 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 EZH1Q92800 747 aaPredicted RBP15.87■□□□□ 0.13
SDC3-203ENST00000471567 RNF34Q969K3 372 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 TMA16Q96EY4 203 aaKnown RBP15.87■□□□□ 0.13
SDC3-203ENST00000471567 SELENOOQ9BVL4 669 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 SLC2A11Q9BYW1 496 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 METTL5Q9NRN9 209 aaKnown RBP15.87■□□□□ 0.13
SDC3-203ENST00000471567 DNAJC17Q9NVM6 304 aaKnown RBP15.87■□□□□ 0.13
SDC3-203ENST00000471567 PAXBP1Q9Y5B6 917 aa15.87■□□□□ 0.13
SDC3-203ENST00000471567 TCRBV5S1A1TA0A578 114 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 SIGLEC16A6NMB1 481 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 CHURC1-FNTBB4DL54 471 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 K7EQS6 105 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 AP5Z1O43299 807 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 LAMTOR5O43504 91 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 RTN2O75298 545 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 CISD3P0C7P0 127 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 CXCR3P49682 368 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 CCR3P51677 355 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 PTPN5P54829 565 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 DEUP1Q05D60 604 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 NME3Q13232 169 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 BRMS1LQ5PSV4 323 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 PIK3R6Q5UE93 754 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 OTUD1Q5VV17 481 aaPredicted RBP15.86■□□□□ 0.13
SDC3-203ENST00000471567 NADSYN1Q6IA69 706 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 TRNP1Q6NT89 227 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 BNIPLQ7Z465 357 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 PRSS33Q8NF86 280 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 KCNV2Q8TDN2 545 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 TBCBQ99426 244 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 DNAJC7Q99615 494 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 TAS2R14Q9NYV8 317 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 PLK2Q9NYY3 685 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 FBXO4Q9UKT5 387 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 SLC27A6Q9Y2P4 619 aa15.86■□□□□ 0.13
SDC3-203ENST00000471567 SYNJ2BP-COX16A0A087WUM0 186 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 GOLGA6L7A0A1B0GV03 622 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 TBC1D3BA6NDS4 549 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 C2CD4BA6NLJ0 364 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 TSPAN3O60637 253 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 RNF40O75150 1001 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 ENDOD1O94919 500 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 MOCS2O96007 188 aaPredicted RBP15.85■□□□□ 0.13
SDC3-203ENST00000471567 FTLP02792 175 aaPredicted RBP15.85■□□□□ 0.13
SDC3-203ENST00000471567 PDGFRAP16234 1089 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 SDC4P31431 198 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 SLC6A4P31645 630 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 PTPN9P43378 593 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 CXCL12P48061 93 aa15.85■□□□□ 0.13
SDC3-203ENST00000471567 DGKGP49619 791 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms