RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 MMRN1Q13201 1228 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 DPYSL3Q14195 570 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 CCDC85BQ15834 202 aaPredicted RBP10.27□□□□□ -0.77
SF3A1-207ENST00000471342 CDO1Q16878 200 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 LEXMQ3ZCV2 418 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 MS4A13Q5J8X5 152 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 C10orf120Q5SQS8 335 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 TANGO2Q6ICL3 276 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 SYT10Q6XYQ8 523 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 PDZD4Q76G19 769 aaPredicted RBP10.27□□□□□ -0.77
SF3A1-207ENST00000471342 POLNQ7Z5Q5 900 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 DAAM2Q86T65 1068 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 NLRP14Q86W24 1093 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 MIB1Q86YT6 1006 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 CREG2Q8IUH2 290 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 TP53INP2Q8IXH6 220 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 KATNAL2Q8IYT4 538 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 MSANTD4Q8NCY6 345 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 PCDH19Q8TAB3 1148 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 ZSCAN18Q8TBC5 510 aaPredicted RBP10.27□□□□□ -0.77
SF3A1-207ENST00000471342 TEKT4Q8WW24 435 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 IGSF8Q969P0 613 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 AZIN2Q96A70 460 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 VOPP1Q96AW1 172 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 CALR3Q96L12 384 aaKnown RBP10.27□□□□□ -0.77
SF3A1-207ENST00000471342 TKTL2Q9H0I9 626 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 LINC00597Q9H2U6 94 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 NDFIP2Q9NV92 336 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 KLHL11Q9NVR0 708 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 SMARCAL1Q9NZC9 954 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 EHD2Q9NZN4 543 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 EPS15L1Q9UBC2 864 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 DNMT3LQ9UJW3 386 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 CLEC4EQ9ULY5 219 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 HBS1LQ9Y450 684 aaKnown RBP10.27□□□□□ -0.77
SF3A1-207ENST00000471342 CPQQ9Y646 472 aa10.27□□□□□ -0.77
SF3A1-207ENST00000471342 VCANP13611 3396 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 SCAMP3O14828 347 aaKnown RBP10.26□□□□□ -0.77
SF3A1-207ENST00000471342 DCLK1O15075 740 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 SRGAP2O75044 1071 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 PAGE1O75459 146 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 RALAP11233 206 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 PRLRP16471 622 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 FSHRP23945 695 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 KDELR1P24390 212 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 DDX6P26196 483 aaKnown RBP eCLIP10.26□□□□□ -0.77
SF3A1-207ENST00000471342 TBX4P57082 545 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 GNG11P61952 73 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 DEUP1Q05D60 604 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 MESP2Q0VG99 397 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 SLC10A2Q12908 348 aaPredicted RBP10.26□□□□□ -0.77
SF3A1-207ENST00000471342 NME3Q13232 169 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 ZNF211Q13398 564 aaPredicted RBP10.26□□□□□ -0.77
SF3A1-207ENST00000471342 DPYSQ14117 519 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 CLUL1Q15846 466 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 SMTNL2Q2TAL5 461 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 ARHGAP29Q52LW3 1261 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 BRMS1LQ5PSV4 323 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 AFMIDQ63HM1 303 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 MFSD7Q6UXD7 560 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 PSTKQ8IV42 348 aaKnown RBP10.26□□□□□ -0.77
SF3A1-207ENST00000471342 TRIM58Q8NG06 486 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 SH3RF2Q8TEC5 729 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 FGF14Q92915 247 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 ALG14Q96F25 216 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 C1orf74Q96LT6 269 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 HAPLN3Q96S86 360 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 OLA1Q9NTK5 396 aaKnown RBP10.26□□□□□ -0.77
SF3A1-207ENST00000471342 SMPD4Q9NXE4 827 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.26□□□□□ -0.77
SF3A1-207ENST00000471342 CWC15Q9P013 229 aaKnown RBP10.26□□□□□ -0.77
SF3A1-207ENST00000471342 DPP7Q9UHL4 492 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 CD207Q9UJ71 328 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 RASAL2Q9UJF2 1139 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 CDH7Q9ULB5 785 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 SNX12Q9UMY4 172 aa10.26□□□□□ -0.77
SF3A1-207ENST00000471342 MRPS23Q9Y3D9 190 aaKnown RBP10.26□□□□□ -0.77
SF3A1-207ENST00000471342 COL4A3Q01955 1670 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 GOLGA6L9A6NEM1 432 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 ANTXRLA6NF34 631 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 PI4K2BG5E9Z4 385 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 ZNF197O14709 1029 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 PSTPIP1O43586 416 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 CNTN5O94779 1100 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 LRIG2O94898 1065 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 IPO7O95373 1038 aaKnown RBP10.25□□□□□ -0.77
SF3A1-207ENST00000471342 F9P00740 461 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 HMBSP08397 361 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 LAMP2P13473 410 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 FOSL2P15408 326 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 KCNA5P22460 613 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 PTPN7P35236 360 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 TFF2Q03403 129 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 SMAD2Q15796 467 aaKnown RBP10.25□□□□□ -0.77
SF3A1-207ENST00000471342 ALFQ53S48 1182 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 ERMARDQ5T6L9 678 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 IER5LQ5T953 404 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 ASTLQ6HA08 431 aaPredicted RBP10.25□□□□□ -0.77
SF3A1-207ENST00000471342 FBXL22Q6P050 247 aa10.25□□□□□ -0.77
SF3A1-207ENST00000471342 PARM1Q6UWI2 310 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms