RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 GRHL1Q9NZI5 618 aa18.16■□□□□ 0.5
HSPG2-208ENST00000471322 CCDC195A0A1B0GUA6 201 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 APOC4-APOC2K7ER74 178 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 OPA1O60313 960 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 APOC2P02655 101 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 ATF2P15336 505 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 HOXB8P17481 243 aaPredicted RBP18.15■□□□□ 0.5
HSPG2-208ENST00000471322 DAOAP59103 153 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 SPATA2LQ8IUW3 424 aaPredicted RBP18.15■□□□□ 0.5
HSPG2-208ENST00000471322 ZMIZ2Q8NF64 920 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 ZNF461Q8TAF7 563 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 FAM71BQ8TC56 605 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 ART4Q93070 314 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 NT5C3BQ969T7 300 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 ULBP1Q9BZM6 244 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 NEUROG2Q9H2A3 272 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 PRDM16Q9HAZ2 1276 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 DZANK1Q9NVP4 752 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 FBXW11Q9UKB1 542 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 NEU2Q9Y3R4 380 aa18.15■□□□□ 0.5
HSPG2-208ENST00000471322 BDP1A6H8Y1 2624 aa18.14■□□□□ 0.5
HSPG2-208ENST00000471322 ZBED1O96006 694 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 C8AP07357 584 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 ADCY8P40145 1251 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 CBX1P83916 185 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 SMAD4Q13485 552 aaKnown RBP18.14■□□□□ 0.49
HSPG2-208ENST00000471322 DPYSL3Q14195 570 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 OASLQ15646 514 aaKnown RBP18.14■□□□□ 0.49
HSPG2-208ENST00000471322 NFE2Q16621 373 aaPredicted RBP18.14■□□□□ 0.49
HSPG2-208ENST00000471322 DCAF6Q58WW2 860 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 TJAP1Q5JTD0 557 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 ZDHHC24Q6UX98 284 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 IQCKQ8N0W5 287 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 GOLGA6L1Q8N7Z2 621 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 TSEN2Q8NCE0 465 aaKnown RBP18.14■□□□□ 0.49
HSPG2-208ENST00000471322 SLC35B2Q8TB61 432 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.14■□□□□ 0.49
HSPG2-208ENST00000471322 RNF157Q96PX1 679 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 KCNK16Q96T55 309 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 ZNF670Q9BS34 389 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 ADAM7Q9H2U9 754 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 SFXN1Q9H9B4 322 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 CYP4F11Q9HBI6 524 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 DNPEPQ9ULA0 475 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 TSC2P49815 1807 aa18.14■□□□□ 0.49
HSPG2-208ENST00000471322 HHLA1C9JL84 531 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 PRRG1O14668 218 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 CAPN9O14815 690 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 CCL16O15467 120 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 PPFIA2O75334 1257 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 SEC24AO95486 1093 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 KRT14P02533 472 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 CD48P09326 243 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 BDNFP23560 247 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 SULT1E1P49888 294 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 DHX9Q08211 1270 aaKnown RBP18.13■□□□□ 0.49
HSPG2-208ENST00000471322 DPYSL2Q16555 572 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 SLC39A12Q504Y0 691 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 PM20D1Q6GTS8 502 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 CES5AQ6NT32 575 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 TMC3Q7Z5M5 1100 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 ALLCQ8N6M5 410 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 ATAD1Q8NBU5 361 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 ACTL9Q8TC94 416 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 FBXO25Q8TCJ0 367 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 NPY6RQ99463 290 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 SNRNP25Q9BV90 132 aaKnown RBP18.13■□□□□ 0.49
HSPG2-208ENST00000471322 PCDH18Q9HCL0 1135 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 CUL9Q8IWT3 2517 aa18.13■□□□□ 0.49
HSPG2-208ENST00000471322 OR6C75A6NL08 312 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 ABLIM3O94929 683 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 ZFXP17010 805 aaPredicted RBP18.12■□□□□ 0.49
HSPG2-208ENST00000471322 OAS2P29728 719 aaKnown RBP18.12■□□□□ 0.49
HSPG2-208ENST00000471322 ELF1P32519 619 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 AIF1P55008 147 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 DYNLT1P63172 113 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 SLMAPQ14BN4 828 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 LRIG3Q6UXM1 1119 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 CEP128Q6ZU80 1094 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 BEND5Q7L4P6 421 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 BNIPLQ7Z465 357 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 LRRTM3Q86VH5 581 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 TTC9BQ8N6N2 239 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 FUBP3Q96I24 572 aaKnown RBP eCLIP18.12■□□□□ 0.49
HSPG2-208ENST00000471322 OXCT2Q9BYC2 517 aaPredicted RBP18.12■□□□□ 0.49
HSPG2-208ENST00000471322 ZCWPW1Q9H0M4 648 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 CRISPLD1Q9H336 500 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 TMLHEQ9NVH6 421 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 SLC27A5Q9Y2P5 690 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 MCF2LO15068 1137 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 SOAT2O75908 522 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 VNN2O95498 520 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 LTFP02788 710 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 TGM2P21980 687 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 IVDP26440 423 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 RDXP35241 583 aaKnown RBP18.12■□□□□ 0.49
HSPG2-208ENST00000471322 GGCXP38435 758 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 CACNA2D1P54289 1103 aa18.12■□□□□ 0.49
HSPG2-208ENST00000471322 OTUD4Q01804 1114 aaKnown RBP18.12■□□□□ 0.49
HSPG2-208ENST00000471322 DUSP4Q13115 394 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms