RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 SPDYE5A6NIY4 337 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 A6NJR5 290 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 SPECC1L-ADORA2AF8WAN1 911 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 H3BRJ5 948 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 PPEF2O14830 753 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 SKAP2O75563 359 aaPredicted RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 CAPN15O75808 1086 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 ENO1P06733 434 aaKnown RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 ATXN1P54253 815 aaKnown RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 SARNPP82979 210 aaKnown RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 TRMT5Q32P41 509 aaKnown RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 HEATR6Q6AI08 1181 aaKnown RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 STRADAQ7RTN6 431 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 CCNJLQ8IV13 435 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 PDCD7Q8N8D1 485 aaKnown RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 ANKRD52Q8NB46 1076 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 SHCBP1Q8NEM2 672 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 PPTC7Q8NI37 304 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 HTR3CQ8WXA8 447 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 SCG3Q8WXD2 468 aaKnown RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 ARNTL2Q8WYA1 636 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 OTUD5Q96G74 571 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 SNX27Q96L92 541 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 ZMAT2Q96NC0 199 aaKnown RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 C16orf70Q9BSU1 422 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 CXCL16Q9H2A7 254 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 CCDC195A0A1B0GUA6 201 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 DPPA5A6NC42 116 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 GLRA3O75311 464 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 ALDOAP04075 364 aaKnown RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 FGF3P11487 239 aaPredicted RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 AMPD1P23109 780 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 BST2Q10589 180 aaKnown RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 THOC5Q13769 683 aaKnown RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 SOWAHAQ2M3V2 549 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 RABGAP1LQ5R372 815 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 TEDDM1Q5T9Z0 273 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 POTEAQ6S8J7 498 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 ARMCX2Q7L311 632 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 ZNF410Q86VK4 478 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 MYLK4Q86YV6 388 aaPredicted RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 PSTKQ8IV42 348 aaKnown RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 SCUBE1Q8IWY4 988 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 CRYBG2Q8N1P7 616 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 TFB1MQ8WVM0 346 aaKnown RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 STMN2Q93045 179 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 ZNF778Q96MU6 729 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 MAGEB5Q9BZ81 275 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 ELP3Q9H9T3 547 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 KRT82Q9NSB4 513 aa14.08□□□□□ -0.16
BRCA1-209ENST00000470026 DICER1Q9UPY3 1922 aaKnown RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.08□□□□□ -0.16
BRCA1-209ENST00000470026 SF3B1O75533 1304 aaKnown RBP eCLIP14.07□□□□□ -0.161e-9■■■■■ 99.9
BRCA1-209ENST00000470026 DCAF8L1A6NGE4 600 aa14.07□□□□□ -0.16
BRCA1-209ENST00000470026 NEBLO76041 1014 aa14.07□□□□□ -0.16
BRCA1-209ENST00000470026 NPTXRO95502 500 aa14.07□□□□□ -0.16
BRCA1-209ENST00000470026 PRKCGP05129 697 aa14.07□□□□□ -0.16
BRCA1-209ENST00000470026 ADORA2AP29274 412 aa14.07□□□□□ -0.16
BRCA1-209ENST00000470026 CPOXP36551 454 aa14.07□□□□□ -0.16
BRCA1-209ENST00000470026 CPA2P48052 419 aa14.07□□□□□ -0.16
BRCA1-209ENST00000470026 ACTR3P61158 418 aa14.07□□□□□ -0.16
BRCA1-209ENST00000470026 INSCQ1MX18 579 aa14.07□□□□□ -0.16
BRCA1-209ENST00000470026 FASTKD1Q53R41 847 aaKnown RBP14.07□□□□□ -0.16
BRCA1-209ENST00000470026 PACS1Q6VY07 963 aa14.07□□□□□ -0.16
BRCA1-209ENST00000470026 CCDC185Q8N715 623 aa14.07□□□□□ -0.16
BRCA1-209ENST00000470026 CLEC4CQ8WTT0 213 aa14.07□□□□□ -0.16
BRCA1-209ENST00000470026 NLRP7Q8WX94 980 aa14.07□□□□□ -0.16
BRCA1-209ENST00000470026 WDR27A2RRH5 827 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 PRR5-ARHGAP8B1AHC4 643 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 PLIN3O60664 434 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 OPHN1O60890 802 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 TOP3BO95985 862 aaKnown RBP14.06□□□□□ -0.16
BRCA1-209ENST00000470026 SKIP12755 728 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 ALOX15P16050 662 aaPredicted RBP14.06□□□□□ -0.16
BRCA1-209ENST00000470026 HOXA11P31270 313 aaPredicted RBP14.06□□□□□ -0.16
BRCA1-209ENST00000470026 ACADSBP45954 432 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 IREB2P48200 963 aaKnown RBP14.06□□□□□ -0.16
BRCA1-209ENST00000470026 BCAT1P54687 386 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 ARHGAP8P85298 464 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 PDE1CQ14123 709 aaPredicted RBP14.06□□□□□ -0.16
BRCA1-209ENST00000470026 MARCH8Q5T0T0 291 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 ALKAL1Q6UXT8 129 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 BNIPLQ7Z465 357 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 ULK2Q8IYT8 1036 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 C7orf31Q8N865 590 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 PIWIL2Q8TC59 973 aaKnown RBP14.06□□□□□ -0.16
BRCA1-209ENST00000470026 HSFY1Q96LI6 401 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 FAM161BQ96MY7 647 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 SYT15Q9BQS2 421 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 EBF4Q9BQW3 602 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 DPEP3Q9H4B8 488 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 GPAMQ9HCL2 828 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 DDX43Q9NXZ2 648 aaKnown RBP14.06□□□□□ -0.16
BRCA1-209ENST00000470026 SLC7A8Q9UHI5 535 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 FZD10Q9ULW2 581 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 PDCD11Q14690 1871 aaKnown RBP14.06□□□□□ -0.16
BRCA1-209ENST00000470026 CCDC189A1A4V9 331 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 PGAM1P18669 254 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 GLUD2P49448 558 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 SESN3P58005 492 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms