RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 CD93Q9NPY3 652 aa17.01■□□□□ 0.31
COL9A3-208ENST00000469802 RWDD2AQ9UIY3 292 aa17.01■□□□□ 0.31
COL9A3-208ENST00000469802 PILRBQ9UKJ0 227 aa17.01■□□□□ 0.31
COL9A3-208ENST00000469802 C4orf47A7E2U8 309 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 PIK3R2O00459 728 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 FBXO21O94952 628 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 LTFP02788 710 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 ITPKAP23677 461 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 IRX4P78413 519 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 RING1Q06587 406 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 FUT11Q495W5 492 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 MPPE1Q53F39 396 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 TRIM61Q5EBN2 209 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 ADGRF1Q5T601 910 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 SLC23A3Q6PIS1 610 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 METTL3Q86U44 580 aaKnown RBP17■□□□□ 0.31
COL9A3-208ENST00000469802 TMEM9BQ9NQ34 198 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 ELOVL2Q9NXB9 296 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 CYP8B1Q9UNU6 501 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 KMT2BQ9UMN6 2715 aaPredicted RBP17■□□□□ 0.31
COL9A3-208ENST00000469802 EPG5Q9HCE0 2579 aa17■□□□□ 0.31
COL9A3-208ENST00000469802 ATXN2Q99700 1313 aaKnown RBP16.99■□□□□ 0.31
COL9A3-208ENST00000469802 ZBTB24O43167 697 aaPredicted RBP16.99■□□□□ 0.31
COL9A3-208ENST00000469802 KCNK5O95279 499 aa16.99■□□□□ 0.31
COL9A3-208ENST00000469802 FGFR1OPO95684 399 aaKnown RBP16.99■□□□□ 0.31
COL9A3-208ENST00000469802 FYNP06241 537 aa16.99■□□□□ 0.31
COL9A3-208ENST00000469802 HLA-FP30511 346 aa16.99■□□□□ 0.31
COL9A3-208ENST00000469802 GPD2P43304 727 aa16.99■□□□□ 0.31
COL9A3-208ENST00000469802 ZNF234Q14588 700 aa16.99■□□□□ 0.31
COL9A3-208ENST00000469802 TRIM65Q6PJ69 517 aa16.99■□□□□ 0.31
COL9A3-208ENST00000469802 SLC41A1Q8IVJ1 513 aa16.99■□□□□ 0.31
COL9A3-208ENST00000469802 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.99■□□□□ 0.31
COL9A3-208ENST00000469802 UCMAQ8WVF2 138 aa16.99■□□□□ 0.31
COL9A3-208ENST00000469802 ERLEC1Q96DZ1 483 aa16.99■□□□□ 0.31
COL9A3-208ENST00000469802 IRX2Q9BZI1 471 aaPredicted RBP16.99■□□□□ 0.31
COL9A3-208ENST00000469802 MKRN2Q9H000 416 aaKnown RBP16.99■□□□□ 0.31
COL9A3-208ENST00000469802 USP36Q9P275 1121 aaKnown RBP16.99■□□□□ 0.31
COL9A3-208ENST00000469802 MAP1BP46821 2468 aaKnown RBP16.99■□□□□ 0.31
COL9A3-208ENST00000469802 C7P10643 843 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 NCAM1P13591 858 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 PRKCHP24723 683 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 PMLP29590 882 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 SGSHP51688 502 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 ZNF33AQ06730 810 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 LMAN2Q12907 356 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 NNTQ13423 1086 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 STARD3Q14849 445 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 E2F5Q15329 346 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 CAMK4Q16566 473 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 FAM133BQ5BKY9 247 aaKnown RBP16.98■□□□□ 0.31
COL9A3-208ENST00000469802 N4BP2L1Q5TBK1 243 aaPredicted RBP16.98■□□□□ 0.31
COL9A3-208ENST00000469802 NUGGCQ68CJ6 796 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 ENOSF1Q7L5Y1 443 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 KIAA0907Q7Z7F0 614 aaPredicted RBP16.98■□□□□ 0.31
COL9A3-208ENST00000469802 IRF2BP1Q8IU81 584 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 SORCS1Q8WY21 1168 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 AZIN2Q96A70 460 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 CNTNAP3BQ96NU0 1288 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 SLC4A5Q9BY07 1137 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 CNTNAP3Q9BZ76 1288 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 CAPN10Q9HC96 672 aa16.98■□□□□ 0.31
COL9A3-208ENST00000469802 TP53BP1Q12888 1972 aaPredicted RBP16.97■□□□□ 0.31
COL9A3-208ENST00000469802 TIMM44O43615 452 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 TSPAN3O60637 253 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 KRT5P13647 590 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 SLC6A4P31645 630 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 COPAP53621 1224 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 MPP7Q5T2T1 576 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 DAB2IPQ5VWQ8 1189 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 DENND1BQ6P3S1 775 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 KIAA1324Q6UXG2 1013 aaKnown RBP16.97■□□□□ 0.31
COL9A3-208ENST00000469802 BEND5Q7L4P6 421 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 UNC45BQ8IWX7 931 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 DQX1Q8TE96 717 aaKnown RBP16.97■□□□□ 0.31
COL9A3-208ENST00000469802 WFIKKN2Q8TEU8 576 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 STK32AQ8WU08 396 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 ZNF419Q96HQ0 510 aaPredicted RBP16.97■□□□□ 0.31
COL9A3-208ENST00000469802 FCRL2Q96LA5 508 aaPredicted RBP16.97■□□□□ 0.31
COL9A3-208ENST00000469802 HSPA12BQ96MM6 686 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 NUSAP1Q9BXS6 441 aaKnown RBP16.97■□□□□ 0.31
COL9A3-208ENST00000469802 CIPCQ9C0C6 399 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 PRDM16Q9HAZ2 1276 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 UBE2TQ9NPD8 197 aaPredicted RBP16.97■□□□□ 0.31
COL9A3-208ENST00000469802 CYTH4Q9UIA0 394 aa16.97■□□□□ 0.31
COL9A3-208ENST00000469802 NUMA1Q14980 2115 aa16.96■□□□□ 0.31
COL9A3-208ENST00000469802 GTPBP10A4D1E9 387 aaKnown RBP16.96■□□□□ 0.31
COL9A3-208ENST00000469802 BECN2A8MW95 431 aa16.96■□□□□ 0.31
COL9A3-208ENST00000469802 IRAK2O43187 625 aa16.96■□□□□ 0.31
COL9A3-208ENST00000469802 SART1O43290 800 aaKnown RBP16.96■□□□□ 0.31
COL9A3-208ENST00000469802 ACSL4O60488 711 aa16.96■□□□□ 0.31
COL9A3-208ENST00000469802 IGLV3-19P01714 112 aa16.96■□□□□ 0.31
COL9A3-208ENST00000469802 ENGP17813 658 aa16.96■□□□□ 0.31
COL9A3-208ENST00000469802 KCNA4P22459 653 aa16.96■□□□□ 0.31
COL9A3-208ENST00000469802 ACADSBP45954 432 aa16.96■□□□□ 0.31
COL9A3-208ENST00000469802 TBX4P57082 545 aa16.96■□□□□ 0.31
COL9A3-208ENST00000469802 DUOXA1Q1HG43 343 aa16.96■□□□□ 0.31
COL9A3-208ENST00000469802 PIK3R6Q5UE93 754 aa16.96■□□□□ 0.31
COL9A3-208ENST00000469802 NADSYN1Q6IA69 706 aa16.96■□□□□ 0.31
COL9A3-208ENST00000469802 PSAPL1Q6NUJ1 521 aa16.96■□□□□ 0.31
COL9A3-208ENST00000469802 ADIPOR2Q86V24 386 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms