RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 PSAT1Q9Y617 370 aa19.72■□□□□ 0.75
VIM-203ENST00000469543 PRKCHP24723 683 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 MAGEA3P43357 314 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 HSF5Q4G112 596 aaPredicted RBP19.71■□□□□ 0.75
VIM-203ENST00000469543 C16orf46Q6P387 395 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 COLGALT1Q8NBJ5 622 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 KCNV2Q8TDN2 545 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 TFB1MQ8WVM0 346 aaKnown RBP19.71■□□□□ 0.75
VIM-203ENST00000469543 P2RY11Q96G91 374 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 AGAP3Q96P47 875 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 TMEM120AQ9BXJ8 343 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 TXLNGQ9NUQ3 528 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 KRT37O76014 449 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 ADAM17P78536 824 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 NBPF20Q3BBV1 942 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 MDH1BQ5I0G3 518 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 GPRIN1Q7Z2K8 1008 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 ALYREFQ86V81 257 aaKnown RBP19.71■□□□□ 0.75
VIM-203ENST00000469543 LONP2Q86WA8 852 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 ZDHHC17Q8IUH5 632 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 NDUFAF2Q8N183 169 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 DEPDC1BQ8WUY9 529 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 MIPEPQ99797 713 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 TRIM55Q9BYV6 548 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 FZD10Q9ULW2 581 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 PLLPQ9Y342 182 aa19.71■□□□□ 0.75
VIM-203ENST00000469543 MKI67P46013 3256 aaKnown RBP19.71■□□□□ 0.75
VIM-203ENST00000469543 I3L4J1 428 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 ENTPD5O75356 428 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 MYL2P10916 166 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 ALADP13716 330 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 CDC25CP30307 473 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 CDKL3Q8IVW4 592 aaPredicted RBP19.7■□□□□ 0.74
VIM-203ENST00000469543 GPATCH11Q8N954 259 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 LRMDAQ9H2I8 198 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 PNPLA8Q9NP80 782 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 SNX10Q9Y5X0 201 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 FYNP06241 537 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 TROVE2P10155 538 aaKnown RBP eCLIP19.7■□□□□ 0.74
VIM-203ENST00000469543 ARFIP2P53365 341 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 BST1Q10588 318 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 SLC25A52Q3SY17 297 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 PAN2Q504Q3 1202 aaKnown RBP19.7■□□□□ 0.74
VIM-203ENST00000469543 CLEC20AQ6ZU45 233 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 FAM13CQ8NE31 585 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 USP6NLQ92738 828 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 QKIQ96PU8 341 aaKnown RBP eCLIP19.7■□□□□ 0.74
VIM-203ENST00000469543 GDAP2Q9NXN4 497 aa19.7■□□□□ 0.74
VIM-203ENST00000469543 YJEFN3A6XGL0 299 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 E7ENQ6 273 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 H0Y3Z8 333 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 DIAPH2O60879 1101 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 CD4P01730 458 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 ZNF865P0CJ78 1059 aaPredicted RBP19.69■□□□□ 0.74
VIM-203ENST00000469543 YY1P25490 414 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 MGAT1P26572 445 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 SLC8A1P32418 973 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 ARL4AP40617 200 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 RFWD3Q6PCD5 774 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 ANKRD23Q86SG2 305 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 NSMCE1Q8WV22 266 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 MED10Q9BTT4 135 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 DUSP16Q9BY84 665 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 PRDM12Q9H4Q4 367 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 MYBPHLA2RUH7 354 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 RNF103O00237 685 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 DGKIO75912 1065 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 EZRP15311 586 aaKnown RBP19.69■□□□□ 0.74
VIM-203ENST00000469543 PTPN1P18031 435 aaKnown RBP19.69■□□□□ 0.74
VIM-203ENST00000469543 PSMB4P28070 264 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 CPA2P48052 419 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 ERFP50548 548 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 FAM110CQ1W6H9 321 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 C3orf58Q8NDZ4 430 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 TTC8Q8TAM2 541 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 GSDMBQ8TAX9 411 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 MAGEC3Q8TD91 643 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 OLFM3Q96PB7 478 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 MYADML2A6NDP7 307 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 CTSHP09668 335 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 TSHRP16473 764 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 DESP17661 470 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 MLH1P40692 756 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 SKIV2L2P42285 1042 aaKnown RBP19.69■□□□□ 0.74
VIM-203ENST00000469543 MAGEA6P43360 314 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 PSEN2P49810 448 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 TKTL1P51854 596 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 TMPRSS15P98073 1019 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 CHI3L2Q15782 390 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 GSTCDQ8NEC7 633 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 RNF139Q8WU17 664 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 ATXN7L3BQ96GX2 97 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 CRTAC1Q9NQ79 661 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 MIOSQ9NXC5 875 aa19.69■□□□□ 0.74
VIM-203ENST00000469543 SPAG6O75602 509 aa19.68■□□□□ 0.74
VIM-203ENST00000469543 MAP2K2P36507 400 aa19.68■□□□□ 0.74
VIM-203ENST00000469543 RPL34P49207 117 aaKnown RBP19.68■□□□□ 0.74
VIM-203ENST00000469543 ZBTB16Q05516 673 aa19.68■□□□□ 0.74
VIM-203ENST00000469543 PPM1JQ5JR12 505 aa19.68■□□□□ 0.74
VIM-203ENST00000469543 SPRYD7Q5W111 196 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms