RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 Q6ZNX1 250 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 SEPT14Q6ZU15 432 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 TFAP2CQ92754 450 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 Q96MF0 132 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.39□□□□□ -1.55
VPS8-219ENST00000469479 IGSF9Q9P2J2 1179 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 SLC17A6Q9P2U8 582 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 FBXO4Q9UKT5 387 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 ZNF215Q9UL58 517 aaPredicted RBP5.39□□□□□ -1.55
VPS8-219ENST00000469479 DUSP12Q9UNI6 340 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 PCDHGA2Q9Y5H1 932 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 MRPL42Q9Y6G3 142 aaKnown RBP5.39□□□□□ -1.55
VPS8-219ENST00000469479 R4GN57 208 aa5.39□□□□□ -1.55
VPS8-219ENST00000469479 A0A1W2PR48 441 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 M0QZ92 97 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 ENPP3O14638 875 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 TBC1D4O60343 1298 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 FGF18O76093 207 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 CSPG5O95196 566 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 ZFYP08048 801 aaPredicted RBP5.38□□□□□ -1.55
VPS8-219ENST00000469479 SP9P0CG40 484 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 SMIM10L2AP0DMW4 78 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 SMIM10L2BP0DMW5 78 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 SCG2P13521 617 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 HOXB6P17509 224 aaKnown RBP5.38□□□□□ -1.55
VPS8-219ENST00000469479 NRG3P56975 720 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 SHC2P98077 582 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 KRT17Q04695 432 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 SCAPQ12770 1279 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 BMT2Q1RMZ1 405 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 ATAT1Q5SQI0 421 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 ODR4Q5SWX8 454 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 CELF3Q5SZQ8 465 aaKnown RBP5.38□□□□□ -1.55
VPS8-219ENST00000469479 KIAA1614Q5VZ46 1190 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 TSHZ1Q6ZSZ6 1077 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 THNSL1Q8IYQ7 743 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 SH2D3CQ8N5H7 860 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 SAMD3Q8N6K7 520 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 SUMF1Q8NBK3 374 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 ZFP28Q8NHY6 868 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 ATRIPQ8WXE1 791 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 RSPH1Q8WYR4 309 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 TNPO1Q92973 898 aaKnown RBP5.38□□□□□ -1.55
VPS8-219ENST00000469479 ZNF778Q96MU6 729 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 SPATA33Q96N06 139 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 STRBPQ96SI9 672 aaKnown RBP5.38□□□□□ -1.55
VPS8-219ENST00000469479 C16orf70Q9BSU1 422 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 NCOA5Q9HCD5 579 aaKnown RBP5.38□□□□□ -1.55
VPS8-219ENST00000469479 ERVK-5Q9HDB9 667 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 TOMM22Q9NS69 142 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 MAP3K20Q9NYL2 800 aaKnown RBP5.38□□□□□ -1.55
VPS8-219ENST00000469479 LRIT1Q9P2V4 623 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 ABCB11O95342 1321 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 NRCAMQ92823 1304 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 MYO5AQ9Y4I1 1855 aaKnown RBP5.38□□□□□ -1.55
VPS8-219ENST00000469479 BPTFQ12830 3046 aa5.38□□□□□ -1.55
VPS8-219ENST00000469479 TRIP12Q14669 1992 aaPredicted RBP5.38□□□□□ -1.55
VPS8-219ENST00000469479 DSPP15924 2871 aaKnown RBP5.37□□□□□ -1.55
VPS8-219ENST00000469479 TMEM8BA6NDV4 472 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 TSPY2A6NKD2 308 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 GSG1L2A8MUP6 293 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 SLC30A4O14863 429 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 PLD2O14939 933 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 PER2O15055 1255 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 BCAR3O75815 825 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 ASLP04424 464 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 GHRP10912 638 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 TRIM27P14373 513 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 ATP5JP18859 108 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 TFAP4Q01664 338 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 TRAF1Q13077 416 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 GIT2Q14161 759 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 SMC1AQ14683 1233 aaKnown RBP5.37□□□□□ -1.55
VPS8-219ENST00000469479 CCDC184Q52MB2 194 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 SPOUT1Q5T280 376 aaKnown RBP5.37□□□□□ -1.55
VPS8-219ENST00000469479 GPATCH4Q5T3I0 446 aaKnown RBP5.37□□□□□ -1.55
VPS8-219ENST00000469479 ARHGEF16Q5VV41 709 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 METRNLQ641Q3 311 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 CYP26C1Q6V0L0 522 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 CCDC149Q6ZUS6 474 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 GPR149Q86SP6 731 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 VN1R2Q8NFZ6 395 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 GAB3Q8WWW8 586 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 MRPS27Q92552 414 aaKnown RBP5.37□□□□□ -1.55
VPS8-219ENST00000469479 FUBP1Q96AE4 644 aaKnown RBP5.37□□□□□ -1.55
VPS8-219ENST00000469479 KIF1BPQ96EK5 621 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 RMDN3Q96TC7 470 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 FAM126AQ9BYI3 521 aaPredicted RBP5.37□□□□□ -1.55
VPS8-219ENST00000469479 ALOXE3Q9BYJ1 711 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 POMKQ9H5K3 350 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 MLXIPQ9HAP2 919 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 ENTPD7Q9NQZ7 604 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 TMEM260Q9NX78 707 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 FOXJ2Q9P0K8 574 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 STK39Q9UEW8 545 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 GMEB2Q9UKD1 530 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 RAB23Q9ULC3 237 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 USP18Q9UMW8 372 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 NOX1Q9Y5S8 564 aa5.37□□□□□ -1.55
VPS8-219ENST00000469479 ITPR1Q14643 2758 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms