RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 DHX58Q96C10 678 aa13.44□□□□□ -0.26
TRAPPC12-216ENST00000469400 CDK5RAP1Q96SZ6 601 aaKnown RBP13.44□□□□□ -0.26
TRAPPC12-216ENST00000469400 SLC2A11Q9BYW1 496 aa13.44□□□□□ -0.26
TRAPPC12-216ENST00000469400 BTBD1Q9H0C5 482 aa13.44□□□□□ -0.26
TRAPPC12-216ENST00000469400 PRORYQ9H606 182 aa13.44□□□□□ -0.26
TRAPPC12-216ENST00000469400 SLC39A2Q9NP94 309 aa13.44□□□□□ -0.26
TRAPPC12-216ENST00000469400 USP3Q9Y6I4 520 aa13.44□□□□□ -0.26
TRAPPC12-216ENST00000469400 CKAP5Q14008 2032 aa13.44□□□□□ -0.26
TRAPPC12-216ENST00000469400 KALRNO60229 2985 aa13.44□□□□□ -0.26
TRAPPC12-216ENST00000469400 PAPSS1O43252 624 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 FSBPO95073 299 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 ASS1P00966 412 aaKnown RBP13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 JUPP14923 745 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 TRIM21P19474 475 aaKnown RBP13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 CASP1P29466 404 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 EIF2S3P41091 472 aaKnown RBP13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 CLDN6P56747 220 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 INAVAQ3KP66 663 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 ZACNQ401N2 412 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 CPXM2Q8N436 756 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 ZNF366Q8N895 744 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 IQUBQ8NA54 791 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 CYB5D2Q8WUJ1 264 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 TAF4BQ92750 862 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 NXPE2Q96DL1 559 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 ORAI3Q9BRQ5 295 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 TMEM245Q9H330 911 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 PTPRQQ9UMZ3 2332 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 PCDHGA1Q9Y5H4 931 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 RAI2Q9Y5P3 530 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 ZNF462Q96JM2 2506 aa13.43□□□□□ -0.26
TRAPPC12-216ENST00000469400 MYH10P35580 1976 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 TLX3O43711 291 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 DFNA5O60443 496 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 KIF20AO95235 890 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 SYT1P21579 422 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 HLA-FP30511 346 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 NASPP49321 788 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 BCAT1P54687 386 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 RPS14P62263 151 aaKnown RBP13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 SEMG2Q02383 582 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 ZBTB16Q05516 673 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 INCA1Q0VD86 236 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 FNDC3BQ53EP0 1204 aaKnown RBP13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 C6orf118Q5T5N4 469 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 LRRC69Q6ZNQ3 347 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 SV2AQ7L0J3 742 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 ADAT2Q7Z6V5 191 aaKnown RBP13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 FAM217AQ8IXS0 508 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 GOLGA5Q8TBA6 731 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 NT5C1AQ9BXI3 368 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 DUSP16Q9BY84 665 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 BLZF1Q9H2G9 400 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 DMAC2Q9NW81 257 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 MARCH2Q9P0N8 246 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 PLA2G4CQ9UP65 541 aa13.42□□□□□ -0.26
TRAPPC12-216ENST00000469400 SHROOM3Q8TF72 1996 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 A0A1B0GTQ1 180 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 SLC12A8A0AV02 714 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 CBX4O00257 560 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 ENC1O14682 589 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 VILLO15195 856 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 PLA2G2AP14555 144 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 HOXD9P28356 352 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 HNF1BP35680 557 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 C21orf59P57076 290 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 CUL4AQ13619 759 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 STK38Q15208 465 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 PRAMEF14Q5SWL7 426 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 ERICH6BQ5W0A0 696 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 RSRC2Q7L4I2 434 aaKnown RBP13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 GATAD2AQ86YP4 633 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 LINC00301Q8NCQ3 95 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 ARID3AQ99856 593 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 ACE2Q9BYF1 805 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 FBRSQ9HAH7 460 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 SGK2Q9HBY8 427 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 PRSS16Q9NQE7 514 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 STRIP2Q9ULQ0 834 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 AK5Q9Y6K8 562 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 CFAP46Q8IYW2 2715 aa13.41□□□□□ -0.26
TRAPPC12-216ENST00000469400 TMEM131Q92545 1883 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 PVALEFA0A1B0GWK0 134 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 RRP8O43159 456 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 RFPL3O75679 317 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 LDOC1O95751 146 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 HLA-DRAP01903 254 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 DNTTP04053 509 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 IGHV4-34P06331 123 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 PIK3CAP42336 1068 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 RACK1P63244 317 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 TARDBPQ13148 414 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 DNAJC3Q13217 504 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 MPPE1Q53F39 396 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 PPP1R26Q5T8A7 1209 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 KIAA0895LQ68EN5 471 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 CHST9Q7L1S5 443 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 ZNF605Q86T29 641 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 ADIPOR2Q86V24 386 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 SLC9A9Q8IVB4 645 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms