RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 MYF6P23409 242 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 ADSLP30566 484 aaPredicted RBP9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 ACADSBP45954 432 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 GYG1P46976 350 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 SLC1A6P48664 564 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 SERPINB9P50453 376 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 THOP1P52888 689 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 ALCAMQ13740 583 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 COG2Q14746 738 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 HERC3Q15034 1050 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 UBE2SQ16763 222 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 FGD3Q5JSP0 725 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 ZNF618Q5T7W0 954 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 WDR78Q5VTH9 848 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 MBLAC2Q68D91 279 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 ZNF280DQ6N043 979 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 RINT1Q6NUQ1 792 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 TTC33Q6PID6 262 aaPredicted RBP9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 ENOSF1Q7L5Y1 443 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 ZNF720Q7Z2F6 126 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 STON2Q8WXE9 905 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 S100ZQ8WXG8 99 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 TRIB2Q92519 343 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 DYNLL2Q96FJ2 89 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 DUS3LQ96G46 650 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 VCPIP1Q96JH7 1222 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 CNDP1Q96KN2 507 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 ZNF778Q96MU6 729 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 UHRF1Q96T88 793 aaPredicted RBP9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 YME1L1Q96TA2 773 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 YTHDF1Q9BYJ9 559 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 C20orf27Q9GZN8 174 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 SIAEQ9HAT2 523 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 PARVAQ9NVD7 372 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 THG1LQ9NWX6 298 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 SUCOQ9UBS9 1254 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 RBMX2Q9Y388 322 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 N6AMT1Q9Y5N5 214 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 CORINQ9Y5Q5 1042 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 SLIT2O94813 1529 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 TBKBP1A7MCY6 615 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 MSI1O43347 362 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 HTRA2O43464 458 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 RFPL1O75677 317 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 UFL1O94874 794 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 KRT6AP02538 564 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 KRT6BP04259 564 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 ERBB2P04626 1255 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 KCNA2P16389 499 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 ADRA2BP18089 450 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 XRCC1P18887 633 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 MAP4P27816 1152 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 RCVRNP35243 200 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 STAT3P40763 770 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 PPP3CAQ08209 521 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 TUBA3CQ13748 450 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 RAB39AQ14964 217 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 GPR107Q5VW38 600 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 ANKRD22Q5VYY1 191 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 BTBD8Q5XKL5 378 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 GALNT18Q6P9A2 607 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 MAMDC4Q6UXC1 1216 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 TRIM72Q6ZMU5 477 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 SPOCD1Q6ZMY3 1216 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 ANKRD13BQ86YJ7 626 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 FAM178BQ8IXR5 827 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 RP9Q8TA86 221 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 DHX38Q92620 1227 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 KAT5Q92993 513 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 FAM20AQ96MK3 541 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 COQ10BQ9H8M1 238 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 ZNF395Q9H8N7 513 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 GPN2Q9H9Y4 310 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 XPNPEP1Q9NQW7 623 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 C8orf4Q9NR00 106 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 DDX56Q9NY93 547 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 XPO7Q9UIA9 1087 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 RGPD3A6NKT7 1758 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 RGPD4Q7Z3J3 1758 aa9.27□□□□□ -0.93
SMARCE1-207ENST00000469334 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 hCG_1818297A0A087WSY0 165 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 ILVBLA1L0T0 632 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 FAM172BPA6NC97 362 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 KBTBD13C9JR72 458 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 MEIS1O00470 390 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 CLOCKO15516 846 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 FOXD2O60548 495 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 KLHL41O60662 606 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 TOM1L1O75674 476 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 RNASEH2AO75792 299 aaKnown RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 IFNB1P01574 187 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 ENO2P09104 434 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 ATF7P17544 494 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 NCF2P19878 526 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 CD247P20963 164 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 CNTFP26441 200 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 ELK3P41970 407 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 NSFP46459 744 aaKnown RBP9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 NUDT2P50583 147 aa9.26□□□□□ -0.93
SMARCE1-207ENST00000469334 CDH15P55291 814 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms