RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 HMBSP08397 361 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 CHRNB1P11230 501 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 TARSP26639 723 aaKnown RBP8.89□□□□□ -0.99
SSBP1-208ENST00000469123 SDC4P31431 198 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 RDXP35241 583 aaKnown RBP8.89□□□□□ -0.99
SSBP1-208ENST00000469123 GRIA2P42262 883 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 PTPN9P43378 593 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 TNFRSF4P43489 277 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 OXCT1P55809 520 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 PTP4A2Q12974 167 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 EIF4EBP2Q13542 120 aaPredicted RBP8.89□□□□□ -0.99
SSBP1-208ENST00000469123 CCINQ13939 588 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 ANO4Q32M45 955 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 ARL13BQ3SXY8 428 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 SYPL2Q5VXT5 272 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 HGSNATQ68CP4 663 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 STRADAQ7RTN6 431 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 TRMT11Q7Z4G4 463 aaKnown RBP8.89□□□□□ -0.99
SSBP1-208ENST00000469123 ETFBKMTQ8IXQ9 262 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 CCDC105Q8IYK2 499 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 MCOLN2Q8IZK6 566 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 HJURPQ8NCD3 748 aaPredicted RBP8.89□□□□□ -0.99
SSBP1-208ENST00000469123 SLC30A5Q8TAD4 765 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 FNIP1Q8TF40 1166 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 CPLX3Q8WVH0 158 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 RNF34Q969K3 372 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 ACDQ96AP0 544 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 PIWIL1Q96J94 861 aaKnown RBP8.89□□□□□ -0.99
SSBP1-208ENST00000469123 PNKPQ96T60 521 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 PCDHB18PQ96TA0 734 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 NPY6RQ99463 290 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.89□□□□□ -0.99
SSBP1-208ENST00000469123 RBSNQ9H1K0 784 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 CHRDQ9H2X0 955 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 DEF6Q9H4E7 631 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 RETREG1Q9H6L5 497 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 ABHD10Q9NUJ1 306 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 PARVAQ9NVD7 372 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 DEC1Q9P2X7 70 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 TJP2Q9UDY2 1190 aa8.89□□□□□ -0.99
SSBP1-208ENST00000469123 MUC6Q6W4X9 2439 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 OTOL1A6NHN0 477 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-208ENST00000469123 C2CD4BA6NLJ0 364 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 KCNU1A8MYU2 1149 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 NEDD8-MDP1E9PL57 170 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 F5H5T6 163 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 GOLGA8SH3BPF8 625 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 M0QYT0 321 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 DDX3XO00571 662 aaKnown RBP eCLIP8.88□□□□□ -0.997e-9■□□□□ 11
SSBP1-208ENST00000469123 TIMM44O43615 452 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 GRAP2O75791 330 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 KAT7O95251 611 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 PAPSS2O95340 614 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-208ENST00000469123 FTLP02792 175 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-208ENST00000469123 TYRP14679 529 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 PDGFRAP16234 1089 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 CDC25BP30305 580 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 OPRD1P41143 372 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 SOX9P48436 509 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 CXCR3P49682 368 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 SULT1E1P49888 294 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 CCR3P51677 355 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 ZNF75DP51815 510 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 AIF1P55008 147 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 RNASE9P60153 205 aaKnown RBP8.88□□□□□ -0.99
SSBP1-208ENST00000469123 DEUP1Q05D60 604 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 ACAP1Q15027 740 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 EIF4HQ15056 248 aaKnown RBP8.88□□□□□ -0.99
SSBP1-208ENST00000469123 PON2Q15165 354 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 TAF5Q15542 800 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 SLC18A3Q16572 532 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 RABGAP1LQ5R372 815 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 E4F1Q66K89 784 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-208ENST00000469123 GRAMD4Q6IC98 578 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 PLEKHA7Q6IQ23 1121 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 DCUN1D2Q6PH85 259 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 TXNDC11Q6PKC3 985 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 TPGS1Q6ZTW0 290 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 TMC6Q7Z403 805 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 BNIPLQ7Z465 357 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-208ENST00000469123 TMEM25Q86YD3 366 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 ZNF687Q8N1G0 1237 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 SPEM1Q8N4L4 309 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 WFIKKN2Q8TEU8 576 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 DDI1Q8WTU0 396 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 UCMAQ8WVF2 138 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 TMA16Q96EY4 203 aaKnown RBP8.88□□□□□ -0.99
SSBP1-208ENST00000469123 PPP1R9BQ96SB3 815 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 FAM126AQ9BYI3 521 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-208ENST00000469123 FOXQ1Q9C009 403 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 ISCUQ9H1K1 167 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 WDCPQ9H6R7 721 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 METTL5Q9NRN9 209 aaKnown RBP8.88□□□□□ -0.99
SSBP1-208ENST00000469123 ARHGEF38Q9NXL2 777 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 DLGAP2Q9P1A6 1054 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 ADAMTS1Q9UHI8 967 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 FBXO10Q9UK96 956 aa8.88□□□□□ -0.99
SSBP1-208ENST00000469123 NDRG2Q9UN36 371 aaKnown RBP8.88□□□□□ -0.99
SSBP1-208ENST00000469123 SLC27A6Q9Y2P4 619 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms