RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 SERPINB9P50453 376 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 TUBP50607 506 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 IRX4P78413 519 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 SLC10A2Q12908 348 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 STILQ15468 1287 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 ZRSR2Q15696 482 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 ACOT1Q86TX2 421 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 PPFIBP2Q8ND30 876 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 FAM136AQ96C01 138 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 B3GNT5Q9BYG0 378 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 DHX35Q9H5Z1 703 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 TAGLN3Q9UI15 199 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 AKT3Q9Y243 479 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 MAP3K13O43283 966 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 SNNO75324 88 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 SKIP12755 728 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 SCUBE1Q8IWY4 988 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 TTC39CQ8N584 583 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 RAB3IL1Q8TBN0 382 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 SYT15Q9BQS2 421 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 SLC4A5Q9BY07 1137 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 MAGEB5Q9BZ81 275 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 LRCH1Q9Y2L9 728 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 HBS1LQ9Y450 684 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 RPS6KL1Q9Y6S9 549 aa16.3■□□□□ 0.2
TSPAN4-211ENST00000468468 BIRC5O15392 142 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 PAPSS1O43252 624 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 VTNP04004 478 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 TPSB2P20231 275 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 L1CAMP32004 1257 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 AP1B1Q10567 949 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 TPSAB1Q15661 275 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 IRGCQ6NXR0 463 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 ADGRF2Q8IZF7 708 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 PPP1R14CQ8TAE6 165 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 UCMAQ8WVF2 138 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 KIF12Q96FN5 646 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 MRPL45Q9BRJ2 306 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 ZNF212Q9UDV6 495 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 G3BP2Q9UN86 482 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 WASF2Q9Y6W5 498 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 A6NJR5 290 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 ATXN1P54253 815 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 CDK18Q07002 472 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 LAMC2Q13753 1193 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 PKDCCQ504Y2 493 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 KCNT2Q6UVM3 1135 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 TMEM110Q86TL2 294 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 EBF4Q9BQW3 602 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 CCDC106Q9BWC9 280 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 C2CD2Q9Y426 696 aa16.29■□□□□ 0.2
TSPAN4-211ENST00000468468 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 F5H423 210 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 GABBR2O75899 941 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 SNAI1O95863 264 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 MXRA7P84157 204 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 POU5F1BQ06416 359 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 LBRQ14739 615 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 SESTD1Q86VW0 696 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 CLPTM1LQ96KA5 538 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 THTPAQ9BU02 230 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 XAB2Q9HCS7 855 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 THAP1Q9NVV9 213 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 PLA2G4CQ9UP65 541 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 NR2E3Q9Y5X4 410 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 PRR5-ARHGAP8B1AHC4 643 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 MAP3K7O43318 606 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 CIB2O75838 187 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 STAU1O95793 577 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 ARHGAP8P85298 464 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 KYAT1Q16773 422 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 SLC5A9Q2M3M2 681 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 FASTKD1Q53R41 847 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 ZNF484Q5JVG2 852 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 C16orf46Q6P387 395 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 NET1Q7Z628 596 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 UNC5BQ8IZJ1 945 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 SLC35F5Q8WV83 523 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 KATNBL1Q9H079 304 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 HESX1Q9UBX0 185 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 SNX9Q9Y5X1 595 aa16.28■□□□□ 0.2
TSPAN4-211ENST00000468468 F8W8V4 182 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 TM7SF2O76062 418 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 ERFP50548 548 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 GTF2A2P52657 109 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 WASHC5Q12768 1159 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 C6orf163Q5TEZ5 329 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 HEATR6Q6AI08 1181 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 TIFABQ6ZNK6 161 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 ARCQ7LC44 396 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 GCOM2Q9BZD3 368 aaPredicted RBP16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 VTA1Q9NP79 307 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 MOCS1Q9NZB8 636 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 DLGAP2Q9P1A6 1054 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 AP4E1Q9UPM8 1137 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 WDR27A2RRH5 827 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 ZNF487B1APH4 448 aa16.27■□□□□ 0.2
TSPAN4-211ENST00000468468 SERPINA6P08185 405 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms