RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 C11orf63Q6NUN7 778 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 SCYL2Q6P3W7 929 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 Q6ZNB5 142 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 FAM131BQ86XD5 332 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 DENND1CQ8IV53 801 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 TPCN2Q8NHX9 752 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 NTAN1Q96AB6 310 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 OTUB2Q96DC9 234 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 LRRC3BQ96PB8 259 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 TKTL2Q9H0I9 626 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 KCNK12Q9HB15 430 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 LZTFL1Q9NQ48 299 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 ARHGEF38Q9NXL2 777 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 TRIM10Q9UDY6 481 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 SALL4Q9UJQ4 1053 aa15.79■□□□□ 0.12
SNIP1-202ENST00000468040 A0A0U1RQJ8 604 aa15.78■□□□□ 0.12
SNIP1-202ENST00000468040 TMEM110-MUSTN1A8MSY1 372 aa15.78■□□□□ 0.12
SNIP1-202ENST00000468040 BUB1O43683 1085 aa15.78■□□□□ 0.12
SNIP1-202ENST00000468040 PRPSAP2O60256 369 aa15.78■□□□□ 0.12
SNIP1-202ENST00000468040 GREM1O60565 184 aa15.78■□□□□ 0.12
SNIP1-202ENST00000468040 BUB1BO60566 1050 aaPredicted RBP15.78■□□□□ 0.12
SNIP1-202ENST00000468040 MOCS2O96007 188 aaPredicted RBP15.78■□□□□ 0.12
SNIP1-202ENST00000468040 MIPP30301 263 aa15.78■□□□□ 0.12
SNIP1-202ENST00000468040 PDGFRLQ15198 375 aa15.78■□□□□ 0.12
SNIP1-202ENST00000468040 HADHQ16836 314 aaKnown RBP15.78■□□□□ 0.12
SNIP1-202ENST00000468040 RIN3Q8TB24 985 aa15.78■□□□□ 0.12
SNIP1-202ENST00000468040 OSCP1Q8WVF1 389 aa15.78■□□□□ 0.12
SNIP1-202ENST00000468040 ATRIPQ8WXE1 791 aa15.78■□□□□ 0.12
SNIP1-202ENST00000468040 DDX50Q9BQ39 737 aaKnown RBP15.78■□□□□ 0.12
SNIP1-202ENST00000468040 TRMT61BQ9BVS5 477 aaKnown RBP15.78■□□□□ 0.12
SNIP1-202ENST00000468040 STOML2Q9UJZ1 356 aa15.78■□□□□ 0.12
SNIP1-202ENST00000468040 AGO1Q9UL18 857 aaKnown RBP15.78■□□□□ 0.12
SNIP1-202ENST00000468040 PYCARDQ9ULZ3 195 aa15.78■□□□□ 0.12
SNIP1-202ENST00000468040 USP18Q9UMW8 372 aa15.78■□□□□ 0.12
SNIP1-202ENST00000468040 GUCA1BQ9UMX6 200 aa15.78■□□□□ 0.12
SNIP1-202ENST00000468040 GOLGA6L9A6NEM1 432 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 C19orf67A6NJJ6 358 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 CHADO15335 359 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 ACSL4O60488 711 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 ADRA1BP35368 520 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 CHKAP35790 457 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 IFNAR2P48551 515 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 SCAPQ12770 1279 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 RAB6CQ53S08 254 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 ADGRF1Q5T601 910 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 SLFN11Q7Z7L1 901 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 DAAM2Q86T65 1068 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 PSTKQ8IV42 348 aaKnown RBP15.77■□□□□ 0.12
SNIP1-202ENST00000468040 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.77■□□□□ 0.12
SNIP1-202ENST00000468040 BBS7Q8IWZ6 715 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 SYCE1Q8N0S2 351 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 ARFGAP1Q8N6T3 406 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 ST13P5Q8NFI4 369 aaPredicted RBP15.77■□□□□ 0.12
SNIP1-202ENST00000468040 WBP2Q969T9 261 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 HAPLN3Q96S86 360 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 RPP25Q9BUL9 199 aaKnown RBP15.77■□□□□ 0.12
SNIP1-202ENST00000468040 PLA2G2FQ9BZM2 168 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 RAB6CQ9H0N0 254 aa15.77■□□□□ 0.12
SNIP1-202ENST00000468040 DUS2Q9NX74 493 aaKnown RBP15.77■□□□□ 0.12
SNIP1-202ENST00000468040 COL6A3P12111 3177 aa15.77■□□□□ 0.11
SNIP1-202ENST00000468040 SCAMP3O14828 347 aaKnown RBP15.76■□□□□ 0.11
SNIP1-202ENST00000468040 SPOPO43791 374 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 PAGE1O75459 146 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 MOCS3O95396 460 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 COMTP21964 271 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 SSR1P43307 286 aaKnown RBP15.76■□□□□ 0.11
SNIP1-202ENST00000468040 GRM2Q14416 872 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 BOLA3Q53S33 107 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 EFHC2Q5JST6 749 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 FAM217AQ8IXS0 508 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 CPXM2Q8N436 756 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 SLC44A3Q8N4M1 653 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 CCDC185Q8N715 623 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 KIAA1524Q8TCG1 905 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 RSAD2Q8WXG1 361 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 ATP2A3Q93084 1043 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 C1orf74Q96LT6 269 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 ALS2CR12Q96Q35 445 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 IRX2Q9BZI1 471 aaPredicted RBP15.76■□□□□ 0.11
SNIP1-202ENST00000468040 PCSK1NQ9UHG2 260 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 ALG6Q9Y672 507 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 WNT6Q9Y6F9 365 aa15.76■□□□□ 0.11
SNIP1-202ENST00000468040 GRID2IPA4D2P6 1211 aa15.75■□□□□ 0.11
SNIP1-202ENST00000468040 NFATC1O95644 943 aa15.75■□□□□ 0.11
SNIP1-202ENST00000468040 KRT7P08729 469 aa15.75■□□□□ 0.11
SNIP1-202ENST00000468040 GDI1P31150 447 aa15.75■□□□□ 0.11
SNIP1-202ENST00000468040 SLC25A11Q02978 314 aaKnown RBP15.75■□□□□ 0.11
SNIP1-202ENST00000468040 TDGQ13569 410 aa15.75■□□□□ 0.11
SNIP1-202ENST00000468040 MS4A13Q5J8X5 152 aa15.75■□□□□ 0.11
SNIP1-202ENST00000468040 TJAP1Q5JTD0 557 aa15.75■□□□□ 0.11
SNIP1-202ENST00000468040 ERMARDQ5T6L9 678 aa15.75■□□□□ 0.11
SNIP1-202ENST00000468040 LRRC38Q5VT99 294 aa15.75■□□□□ 0.11
SNIP1-202ENST00000468040 DAB2IPQ5VWQ8 1189 aa15.75■□□□□ 0.11
SNIP1-202ENST00000468040 POLNQ7Z5Q5 900 aa15.75■□□□□ 0.11
SNIP1-202ENST00000468040 REXO1L1PQ8IX06 675 aa15.75■□□□□ 0.11
SNIP1-202ENST00000468040 CCAR2Q8N163 923 aaKnown RBP15.75■□□□□ 0.11
SNIP1-202ENST00000468040 LRRC57Q8N9N7 239 aa15.75■□□□□ 0.11
SNIP1-202ENST00000468040 UBE2Q2Q8WVN8 375 aa15.75■□□□□ 0.11
SNIP1-202ENST00000468040 TEKT4Q8WW24 435 aa15.75■□□□□ 0.11
SNIP1-202ENST00000468040 IRF7Q92985 503 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms