RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 DQX1Q8TE96 717 aaKnown RBP18.89■□□□□ 0.61
CGREF1-208ENST00000467539 RMDN1Q96DB5 314 aa18.89■□□□□ 0.61
CGREF1-208ENST00000467539 SERPINB11Q96P15 392 aa18.89■□□□□ 0.61
CGREF1-208ENST00000467539 STK33Q9BYT3 514 aa18.89■□□□□ 0.61
CGREF1-208ENST00000467539 VPS16Q9H269 839 aa18.89■□□□□ 0.61
CGREF1-208ENST00000467539 ARRDC1-AS1Q9H2J1 176 aa18.89■□□□□ 0.61
CGREF1-208ENST00000467539 CD248Q9HCU0 757 aa18.89■□□□□ 0.61
CGREF1-208ENST00000467539 PLCB1Q9NQ66 1216 aa18.89■□□□□ 0.61
CGREF1-208ENST00000467539 FANCLQ9NW38 375 aa18.89■□□□□ 0.61
CGREF1-208ENST00000467539 ELOVL2Q9NXB9 296 aa18.89■□□□□ 0.61
CGREF1-208ENST00000467539 DLL3Q9NYJ7 618 aa18.89■□□□□ 0.61
CGREF1-208ENST00000467539 PCDHGA5Q9Y5G8 931 aa18.89■□□□□ 0.61
CGREF1-208ENST00000467539 TCRBV21S2A2A0A5A6 115 aa18.88■□□□□ 0.61
CGREF1-208ENST00000467539 IRAK2O43187 625 aa18.88■□□□□ 0.61
CGREF1-208ENST00000467539 HOXB2P14652 356 aa18.88■□□□□ 0.61
CGREF1-208ENST00000467539 UCHL3P15374 230 aa18.88■□□□□ 0.61
CGREF1-208ENST00000467539 HOXD9P28356 352 aaPredicted RBP18.88■□□□□ 0.61
CGREF1-208ENST00000467539 P2RY2P41231 377 aa18.88■□□□□ 0.61
CGREF1-208ENST00000467539 SNX16P57768 344 aa18.88■□□□□ 0.61
CGREF1-208ENST00000467539 EFHC1Q5JVL4 640 aa18.88■□□□□ 0.61
CGREF1-208ENST00000467539 PIK3R6Q5UE93 754 aa18.88■□□□□ 0.61
CGREF1-208ENST00000467539 PGBD3Q8N328 593 aa18.88■□□□□ 0.61
CGREF1-208ENST00000467539 UCMAQ8WVF2 138 aa18.88■□□□□ 0.61
CGREF1-208ENST00000467539 HMGB4Q8WW32 186 aa18.88■□□□□ 0.61
CGREF1-208ENST00000467539 FCRL2Q96LA5 508 aaPredicted RBP18.88■□□□□ 0.61
CGREF1-208ENST00000467539 NOX5Q96PH1 765 aa18.88■□□□□ 0.61
CGREF1-208ENST00000467539 CPXM1Q96SM3 734 aa18.88■□□□□ 0.61
CGREF1-208ENST00000467539 DDX50Q9BQ39 737 aaKnown RBP18.88■□□□□ 0.61
CGREF1-208ENST00000467539 ASNSD1Q9NWL6 643 aa18.88■□□□□ 0.61
CGREF1-208ENST00000467539 TAB2Q9NYJ8 693 aa18.88■□□□□ 0.61
CGREF1-208ENST00000467539 THAP10Q9P2Z0 257 aaPredicted RBP18.88■□□□□ 0.61
CGREF1-208ENST00000467539 GOLGA6L7A0A1B0GV03 622 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 LRRC10BA6NIK2 292 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 WASH3PC4AMC7 463 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 ZBTB24O43167 697 aaPredicted RBP18.87■□□□□ 0.61
CGREF1-208ENST00000467539 ZNF806P0C7X5 589 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 PNMA6AP0CW24 399 aaPredicted RBP18.87■□□□□ 0.61
CGREF1-208ENST00000467539 GABRG2P18507 467 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 EIF4EBP2Q13542 120 aaPredicted RBP18.87■□□□□ 0.61
CGREF1-208ENST00000467539 ENPP2Q13822 863 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 PUM1Q14671 1186 aaKnown RBP eCLIP18.87■□□□□ 0.61
CGREF1-208ENST00000467539 EIF4HQ15056 248 aaKnown RBP18.87■□□□□ 0.61
CGREF1-208ENST00000467539 KRT31Q15323 416 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 TAF5Q15542 800 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 RSPO4Q2I0M5 234 aaPredicted RBP18.87■□□□□ 0.61
CGREF1-208ENST00000467539 FAM133BQ5BKY9 247 aaKnown RBP18.87■□□□□ 0.61
CGREF1-208ENST00000467539 PLA2G2CQ5R387 149 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 CCDC183Q5T5S1 534 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 RNF43Q68DV7 783 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 ANKS1BQ7Z6G8 1248 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 KIAA0907Q7Z7F0 614 aaPredicted RBP18.87■□□□□ 0.61
CGREF1-208ENST00000467539 IPO4Q8TEX9 1081 aaKnown RBP18.87■□□□□ 0.61
CGREF1-208ENST00000467539 CACNA2D2Q9NY47 1150 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 BCCIPQ9P287 314 aaKnown RBP eCLIP18.87■□□□□ 0.61
CGREF1-208ENST00000467539 TJP2Q9UDY2 1190 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 DMXL1Q9Y485 3027 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 FHOD1Q9Y613 1164 aa18.87■□□□□ 0.61
CGREF1-208ENST00000467539 EML5Q05BV3 1969 aa18.86■□□□□ 0.61
CGREF1-208ENST00000467539 IGLV3-25P01717 112 aa18.86■□□□□ 0.61
CGREF1-208ENST00000467539 TPM2P07951 284 aa18.86■□□□□ 0.61
CGREF1-208ENST00000467539 CYP11B1P15538 503 aa18.86■□□□□ 0.61
CGREF1-208ENST00000467539 GBP1P32455 592 aa18.86■□□□□ 0.61
CGREF1-208ENST00000467539 RAPGEF1Q13905 1077 aa18.86■□□□□ 0.61
CGREF1-208ENST00000467539 STX1AQ16623 288 aa18.86■□□□□ 0.61
CGREF1-208ENST00000467539 MAP7D1Q3KQU3 841 aa18.86■□□□□ 0.61
CGREF1-208ENST00000467539 TMEM215Q68D42 235 aa18.86■□□□□ 0.61
CGREF1-208ENST00000467539 RFWD3Q6PCD5 774 aa18.86■□□□□ 0.61
CGREF1-208ENST00000467539 PRR23CQ6ZRP0 262 aa18.86■□□□□ 0.61
CGREF1-208ENST00000467539 C11orf57Q6ZUT1 292 aaPredicted RBP18.86■□□□□ 0.61
CGREF1-208ENST00000467539 PASD1Q8IV76 773 aa18.86■□□□□ 0.61
CGREF1-208ENST00000467539 RLN3Q8WXF3 142 aa18.86■□□□□ 0.61
CGREF1-208ENST00000467539 LSM14BQ9BX40 385 aaKnown RBP18.86■□□□□ 0.61
CGREF1-208ENST00000467539 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.86■□□□□ 0.61
CGREF1-208ENST00000467539 STON1Q9Y6Q2 735 aa18.86■□□□□ 0.61
CGREF1-208ENST00000467539 CEP250Q9BV73 2442 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 TRUB2O95900 331 aaKnown RBP18.85■□□□□ 0.61
CGREF1-208ENST00000467539 HLA-FP30511 346 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 SLC6A4P31645 630 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 CDH5P33151 784 aaPredicted RBP18.85■□□□□ 0.61
CGREF1-208ENST00000467539 MYL5Q02045 173 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 DCAF6Q58WW2 860 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 SPDYCQ5MJ68 293 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 PMS2CLQ68D20 193 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 NADSYN1Q6IA69 706 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 KIAA1211LQ6NV74 962 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 TAC4Q86UU9 113 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.85■□□□□ 0.61
CGREF1-208ENST00000467539 TMEM35BQ8NCS4 154 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 C1orf131Q8NDD1 294 aaKnown RBP18.85■□□□□ 0.61
CGREF1-208ENST00000467539 ADAM32Q8TC27 787 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 SLC2A13Q96QE2 648 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.85■□□□□ 0.61
CGREF1-208ENST00000467539 LIMA1Q9UHB6 759 aaKnown RBP18.85■□□□□ 0.61
CGREF1-208ENST00000467539 CEP83Q9Y592 693 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 SPAG17Q6Q759 2223 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 ABCA7Q8IZY2 2146 aa18.85■□□□□ 0.61
CGREF1-208ENST00000467539 BCLAF3A2AJT9 711 aaKnown RBP18.84■□□□□ 0.61
CGREF1-208ENST00000467539 MAP3K13O43283 966 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 TBL1XO60907 577 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 BCKDHBP21953 392 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms