RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 BCCIPQ9P287 314 aaKnown RBP eCLIP11.55□□□□□ -0.56
PRPF3-203ENST00000467514 EBF1Q9UH73 591 aa11.55□□□□□ -0.56
PRPF3-203ENST00000467514 GTF3C4Q9UKN8 822 aa11.55□□□□□ -0.56
PRPF3-203ENST00000467514 MAGED2Q9UNF1 606 aaPredicted RBP11.55□□□□□ -0.56
PRPF3-203ENST00000467514 R3HCC1Q9Y3T6 440 aaKnown RBP11.55□□□□□ -0.56
PRPF3-203ENST00000467514 SETXQ7Z333 2677 aaKnown RBP11.55□□□□□ -0.56
PRPF3-203ENST00000467514 ASCC3Q8N3C0 2202 aaKnown RBP11.55□□□□□ -0.56
PRPF3-203ENST00000467514 MYO16Q9Y6X6 1858 aa11.55□□□□□ -0.56
PRPF3-203ENST00000467514 ITPR1Q14643 2758 aa11.55□□□□□ -0.56
PRPF3-203ENST00000467514 M0QZQ0 153 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 O00370 1275 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 RIOK3O14730 519 aaKnown RBP11.54□□□□□ -0.56
PRPF3-203ENST00000467514 BUB1O43683 1085 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 ZIC2O95409 532 aaPredicted RBP11.54□□□□□ -0.56
PRPF3-203ENST00000467514 ATP1A1P05023 1023 aaKnown RBP11.54□□□□□ -0.56
PRPF3-203ENST00000467514 VDRP11473 427 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 MMP8P22894 467 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 TERF1P54274 439 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 NR1H3Q13133 447 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 CNGA2Q16280 664 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 SV2CQ496J9 727 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 ZNF394Q53GI3 561 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 NAA35Q5VZE5 725 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 PPP1R2P3Q6NXS1 205 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 DENND1BQ6P3S1 775 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 DPH6Q7L8W6 267 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 PDZD3Q86UT5 571 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 UNC93AQ86WB7 457 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 METTL23Q86XA0 190 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 PROSER1Q86XN7 944 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 MCOLN2Q8IZK6 566 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 CRYBG2Q8N1P7 616 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 TOP6BLQ8N6T0 577 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 SLC35G2Q8TBE7 412 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 CTNNBL1Q8WYA6 563 aaPredicted RBP11.54□□□□□ -0.56
PRPF3-203ENST00000467514 ATP2A3Q93084 1043 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 VCPIP1Q96JH7 1222 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 FAM83CQ9BQN1 747 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 TLR10Q9BXR5 811 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 ZNF518BQ9C0D4 1074 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 TRPC7Q9HCX4 862 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 ABCB6Q9NP58 842 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 TDP1Q9NUW8 608 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 SEPT11Q9NVA2 429 aaKnown RBP11.54□□□□□ -0.56
PRPF3-203ENST00000467514 DUS2Q9NX74 493 aaKnown RBP11.54□□□□□ -0.56
PRPF3-203ENST00000467514 KIAA1257Q9ULG3 409 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 L1RE1Q9UN81 338 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 CCL26Q9Y258 94 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 JRKLQ9Y4A0 524 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 SNX9Q9Y5X1 595 aa11.54□□□□□ -0.56
PRPF3-203ENST00000467514 ATXN2Q99700 1313 aaKnown RBP11.54□□□□□ -0.56
PRPF3-203ENST00000467514 KIAA1549LQ6ZVL6 1849 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 TCRBV5S1A1TA0A578 114 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 GABRDO14764 452 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 PALMO75781 387 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 VNN2O95498 520 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 MYBL1P10243 752 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 ENGP17813 658 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 ABCB4P21439 1286 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 BCKDHBP21953 392 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 WARSP23381 471 aaKnown RBP11.53□□□□□ -0.56
PRPF3-203ENST00000467514 PAX3P23760 479 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 DDX6P26196 483 aaKnown RBP eCLIP11.53□□□□□ -0.56
PRPF3-203ENST00000467514 WEE1P30291 646 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 GJA4P35212 333 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 C1QBPQ07021 282 aaKnown RBP11.53□□□□□ -0.56
PRPF3-203ENST00000467514 TUBB2AQ13885 445 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 IFI16Q16666 785 aaKnown RBP11.53□□□□□ -0.56
PRPF3-203ENST00000467514 COL28A1Q2UY09 1125 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 C2orf27AQ580R0 203 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 LCLAT1Q6UWP7 414 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 OSTM1Q86WC4 334 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 RHOT2Q8IXI1 618 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 PGBD3Q8N328 593 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 CHCHD4Q8N4Q1 142 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 CPA5Q8WXQ8 436 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 CALR3Q96L12 384 aaKnown RBP11.53□□□□□ -0.56
PRPF3-203ENST00000467514 ALS2CR12Q96Q35 445 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 MMS19Q96T76 1030 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 TUBB2BQ9BVA1 445 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 NT5C1AQ9BXI3 368 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 SLC46A2Q9BY10 475 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 OSGEPQ9NPF4 335 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 ABI2Q9NYB9 513 aaPredicted RBP11.53□□□□□ -0.56
PRPF3-203ENST00000467514 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.53□□□□□ -0.56
PRPF3-203ENST00000467514 PCDHB9Q9Y5E1 797 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 MRFAP1Q9Y605 127 aa11.53□□□□□ -0.56
PRPF3-203ENST00000467514 DENND4CQ5VZ89 1909 aa11.52□□□□□ -0.56
PRPF3-203ENST00000467514 ADAMTS9Q9P2N4 1935 aa11.52□□□□□ -0.56
PRPF3-203ENST00000467514 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.52□□□□□ -0.57
PRPF3-203ENST00000467514 OTOL1A6NHN0 477 aaPredicted RBP11.52□□□□□ -0.57
PRPF3-203ENST00000467514 MED7O43513 233 aa11.52□□□□□ -0.57
PRPF3-203ENST00000467514 BUB1BO60566 1050 aaPredicted RBP11.52□□□□□ -0.57
PRPF3-203ENST00000467514 OPHN1O60890 802 aa11.52□□□□□ -0.57
PRPF3-203ENST00000467514 URI1O94763 535 aaPredicted RBP11.52□□□□□ -0.57
PRPF3-203ENST00000467514 CLSTN1O94985 981 aa11.52□□□□□ -0.57
PRPF3-203ENST00000467514 CKMP06732 381 aa11.52□□□□□ -0.57
PRPF3-203ENST00000467514 ATXN8OSP0DMR3 200 aa11.52□□□□□ -0.57
PRPF3-203ENST00000467514 PRLRP16471 622 aa11.52□□□□□ -0.57
PRPF3-203ENST00000467514 DPP6P42658 865 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms