RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 HIBCHQ6NVY1 386 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-231ENST00000467435 RFX8Q6ZV50 586 aa12.73□□□□□ -0.37
HDLBP-231ENST00000467435 B4GALNT4Q76KP1 1039 aa12.73□□□□□ -0.37
HDLBP-231ENST00000467435 CCDC25Q86WR0 208 aa12.73□□□□□ -0.37
HDLBP-231ENST00000467435 FAM71DQ8N9W8 422 aa12.73□□□□□ -0.37
HDLBP-231ENST00000467435 BADQ92934 168 aa12.73□□□□□ -0.37
HDLBP-231ENST00000467435 SERPINB11Q96P15 392 aa12.73□□□□□ -0.37
HDLBP-231ENST00000467435 QKIQ96PU8 341 aaKnown RBP eCLIP12.73□□□□□ -0.37
HDLBP-231ENST00000467435 EPAS1Q99814 870 aa12.73□□□□□ -0.37
HDLBP-231ENST00000467435 ETNK2Q9NVF9 386 aa12.73□□□□□ -0.37
HDLBP-231ENST00000467435 OSER1Q9NX31 292 aa12.73□□□□□ -0.37
HDLBP-231ENST00000467435 ARHGEF38Q9NXL2 777 aa12.73□□□□□ -0.37
HDLBP-231ENST00000467435 SFMBT1Q9UHJ3 866 aa12.73□□□□□ -0.37
HDLBP-231ENST00000467435 TPX2Q9ULW0 747 aaKnown RBP12.73□□□□□ -0.37
HDLBP-231ENST00000467435 PLAAQ9Y263 795 aa12.73□□□□□ -0.37
HDLBP-231ENST00000467435 MFHAS1Q9Y4C4 1052 aa12.73□□□□□ -0.37
HDLBP-231ENST00000467435 KIAA0100Q14667 2235 aaKnown RBP12.72□□□□□ -0.37
HDLBP-231ENST00000467435 BCLAF3A2AJT9 711 aaKnown RBP12.72□□□□□ -0.37
HDLBP-231ENST00000467435 SLC38A8A6NNN8 435 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 FAM72CH0Y354 149 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 DCLK1O15075 740 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 KCNN4O15554 427 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 OPA1O60313 960 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 SYF2O95926 243 aaKnown RBP12.72□□□□□ -0.37
HDLBP-231ENST00000467435 STIP1P31948 543 aaKnown RBP12.72□□□□□ -0.37
HDLBP-231ENST00000467435 RPL22P35268 128 aaKnown RBP12.72□□□□□ -0.37
HDLBP-231ENST00000467435 PPM1AP35813 382 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 PSEN1P49768 467 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 CBX1P83916 185 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 TAF10Q12962 218 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 EIF4EBP2Q13542 120 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-231ENST00000467435 MORF4L2Q15014 288 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 RNASEH2BQ5TBB1 312 aaKnown RBP12.72□□□□□ -0.37
HDLBP-231ENST00000467435 FAM72AQ5TYM5 149 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 FAM72DQ6L9T8 149 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 LRIG3Q6UXM1 1119 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 PCGF5Q86SE9 256 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 DDX53Q86TM3 631 aaKnown RBP12.72□□□□□ -0.37
HDLBP-231ENST00000467435 FAM72BQ86X60 149 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 IQCKQ8N0W5 287 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 GOLGA6L1Q8N7Z2 621 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 GIPC2Q8TF65 315 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 OLFM3Q96PB7 478 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 CLSTN3Q9BQT9 956 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 ADAM7Q9H2U9 754 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 TLR8Q9NR97 1041 aaKnown RBP12.72□□□□□ -0.37
HDLBP-231ENST00000467435 AAASQ9NRG9 546 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 DTLQ9NZJ0 730 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 AFF4Q9UHB7 1163 aaKnown RBP12.72□□□□□ -0.37
HDLBP-231ENST00000467435 NUDT5Q9UKK9 219 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 SHOC2Q9UQ13 582 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 SNX10Q9Y5X0 201 aa12.72□□□□□ -0.37
HDLBP-231ENST00000467435 CEP350Q5VT06 3117 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 SHROOM3Q8TF72 1996 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 FGBP02675 491 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 RARGP13631 454 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 RBL1P28749 1068 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 CCR1P32246 355 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 ACTN2P35609 894 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 HCAR3P49019 387 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 TUFMP49411 452 aaKnown RBP12.71□□□□□ -0.37
HDLBP-231ENST00000467435 SLC10A2Q12908 348 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-231ENST00000467435 PPP2R5DQ14738 602 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 PAFAH1B3Q15102 231 aaKnown RBP12.71□□□□□ -0.37
HDLBP-231ENST00000467435 SLC45A4Q5BKX6 768 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 PSRC1Q6PGN9 363 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-231ENST00000467435 CEP128Q6ZU80 1094 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 BZW1Q7L1Q6 419 aaKnown RBP12.71□□□□□ -0.37
HDLBP-231ENST00000467435 C16orf59Q7L2K0 433 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 C7orf61Q8IZ16 206 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 ZCCHC9Q8N567 271 aaKnown RBP12.71□□□□□ -0.37
HDLBP-231ENST00000467435 CCDC33Q8N5R6 958 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 PRCCQ92733 491 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-231ENST00000467435 RTP4Q96DX8 246 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 CEP295NLQ96MC4 621 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 SH3GL2Q99962 352 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 FOXP3Q9BZS1 431 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 TSPYL1Q9H0U9 437 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 OSBPL2Q9H1P3 480 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 PABPC3Q9H361 631 aaKnown RBP12.71□□□□□ -0.37
HDLBP-231ENST00000467435 OLA1Q9NTK5 396 aaKnown RBP12.71□□□□□ -0.37
HDLBP-231ENST00000467435 DNAJC17Q9NVM6 304 aaKnown RBP12.71□□□□□ -0.37
HDLBP-231ENST00000467435 TMEM51Q9NW97 253 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 CLIC5Q9NZA1 410 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 PAK5Q9P286 719 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 HSFX1Q9UBD0 423 aa12.71□□□□□ -0.37
HDLBP-231ENST00000467435 MAGED2Q9UNF1 606 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-231ENST00000467435 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-231ENST00000467435 HACD1B0YJ81 288 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 GOLGA8KD6RF30 607 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 PAGE1O75459 146 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 LRIG2O94898 1065 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 GJB5O95377 273 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 ERCC2P18074 760 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 DNAJB2P25686 324 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 NRLP54845 237 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 BASP1P80723 227 aaKnown RBP12.7□□□□□ -0.38
HDLBP-231ENST00000467435 HTRA4P83105 476 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-231ENST00000467435 EFEMP1Q12805 493 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 CEP85LQ5SZL2 805 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms