RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 BUB1O43683 1085 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 PROSCO94903 275 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 TCF3P15923 654 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 TFE3P19532 575 aaPredicted RBP15.33■□□□□ 0.04
DDX56-208ENST00000467318 CCR1P32246 355 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 PCK1P35558 622 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 SLC1A1P43005 524 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 TBX4P57082 545 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 PPP2R5DQ14738 602 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 NUGGCQ68CJ6 796 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 WDR93Q6P2C0 686 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 UNC45BQ8IWX7 931 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 PLCD3Q8N3E9 789 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 CELF5Q8N6W0 485 aaKnown RBP15.33■□□□□ 0.04
DDX56-208ENST00000467318 KIAA1958Q8N8K9 716 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 TRIM58Q8NG06 486 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 TPCN2Q8NHX9 752 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 USP13Q92995 863 aaPredicted RBP15.33■□□□□ 0.04
DDX56-208ENST00000467318 PLD4Q96BZ4 506 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 SLC39A13Q96H72 371 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 BTBD6Q96KE9 485 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 ZFRQ96KR1 1074 aaKnown RBP15.33■□□□□ 0.04
DDX56-208ENST00000467318 FUT8Q9BYC5 575 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 ADAM33Q9BZ11 813 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 WDCPQ9H6R7 721 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 OBP2AQ9NY56 170 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 THEGQ9P2T0 379 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 EPS15L1Q9UBC2 864 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 TRIM10Q9UDY6 481 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 DENND4AQ7Z401 1863 aa15.33■□□□□ 0.04
DDX56-208ENST00000467318 MSI1O43347 362 aaKnown RBP15.32■□□□□ 0.04
DDX56-208ENST00000467318 SEC31AO94979 1220 aaKnown RBP15.32■□□□□ 0.04
DDX56-208ENST00000467318 IGLV3-27P01718 113 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 PRLRP16471 622 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 HARS2P49590 506 aaKnown RBP15.32■□□□□ 0.04
DDX56-208ENST00000467318 CXCR3P49682 368 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 HDAC4P56524 1084 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 MESDQ14696 234 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 MAP9Q49MG5 647 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 FAM78AQ5JUQ0 283 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 BRMS1LQ5PSV4 323 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 SH3PXD2AQ5TCZ1 1133 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 OTUD1Q5VV17 481 aaPredicted RBP15.32■□□□□ 0.04
DDX56-208ENST00000467318 CCDC70Q6NSX1 233 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 RNF34Q969K3 372 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 DCLK3Q9C098 648 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 ZFP14Q9HCL3 533 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 GKN1Q9NS71 199 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 PIGVQ9NUD9 493 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 SMPD4Q9NXE4 827 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 SLC12A6Q9UHW9 1150 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 SYNJ2BP-COX16A0A087WUM0 186 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 TARSL2A2RTX5 802 aaKnown RBP15.32■□□□□ 0.04
DDX56-208ENST00000467318 MAP2K7O14733 419 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 BUB1BO60566 1050 aaPredicted RBP15.32■□□□□ 0.04
DDX56-208ENST00000467318 LRCH4O75427 683 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 STC2O76061 302 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 APOEP02649 317 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 AIF1P55008 147 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 ZXDBP98169 803 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 ARL13BQ3SXY8 428 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 C11orf63Q6NUN7 778 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 MTSS1LQ765P7 747 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 DAAM2Q86T65 1068 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 SYCE1Q8N0S2 351 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 TDRD5Q8NAT2 981 aaKnown RBP15.32■□□□□ 0.04
DDX56-208ENST00000467318 ST13P5Q8NFI4 369 aaPredicted RBP15.32■□□□□ 0.04
DDX56-208ENST00000467318 SH3RF2Q8TEC5 729 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 AZIN2Q96A70 460 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 COX16Q9P0S2 106 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 CALCOCO1Q9P1Z2 691 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 LSM7Q9UK45 103 aaKnown RBP15.32■□□□□ 0.04
DDX56-208ENST00000467318 ZNF510Q9Y2H8 683 aa15.32■□□□□ 0.04
DDX56-208ENST00000467318 DOCK8Q8NF50 2099 aa15.31■□□□□ 0.04
DDX56-208ENST00000467318 E2F8A0AVK6 867 aa15.31■□□□□ 0.04
DDX56-208ENST00000467318 LEFTY2O00292 366 aa15.31■□□□□ 0.04
DDX56-208ENST00000467318 PRAMEF12O95522 483 aa15.31■□□□□ 0.04
DDX56-208ENST00000467318 SP100P23497 879 aaPredicted RBP15.31■□□□□ 0.04
DDX56-208ENST00000467318 HADHQ16836 314 aaKnown RBP15.31■□□□□ 0.04
DDX56-208ENST00000467318 ZC3H12AQ5D1E8 599 aaKnown RBP15.31■□□□□ 0.04
DDX56-208ENST00000467318 BEND6Q5SZJ8 279 aaPredicted RBP15.31■□□□□ 0.04
DDX56-208ENST00000467318 ACBD5Q5T8D3 534 aaPredicted RBP15.31■□□□□ 0.04
DDX56-208ENST00000467318 HTR3DQ70Z44 454 aa15.31■□□□□ 0.04
DDX56-208ENST00000467318 ARFGAP1Q8N6T3 406 aa15.31■□□□□ 0.04
DDX56-208ENST00000467318 RUBCNQ92622 972 aa15.31■□□□□ 0.04
DDX56-208ENST00000467318 FCRL2Q96LA5 508 aaPredicted RBP15.31■□□□□ 0.04
DDX56-208ENST00000467318 EPC1Q9H2F5 836 aa15.31■□□□□ 0.04
DDX56-208ENST00000467318 CCL26Q9Y258 94 aa15.31■□□□□ 0.04
DDX56-208ENST00000467318 SH3BP1Q9Y3L3 701 aa15.31■□□□□ 0.04
DDX56-208ENST00000467318 JRKLQ9Y4A0 524 aa15.31■□□□□ 0.04
DDX56-208ENST00000467318 ALG6Q9Y672 507 aa15.31■□□□□ 0.04
DDX56-208ENST00000467318 KCNU1A8MYU2 1149 aa15.3■□□□□ 0.04
DDX56-208ENST00000467318 PRPSAP2O60256 369 aa15.3■□□□□ 0.04
DDX56-208ENST00000467318 MOCS3O95396 460 aa15.3■□□□□ 0.04
DDX56-208ENST00000467318 LATS1O95835 1130 aa15.3■□□□□ 0.04
DDX56-208ENST00000467318 HMBSP08397 361 aa15.3■□□□□ 0.04
DDX56-208ENST00000467318 MIPP30301 263 aa15.3■□□□□ 0.04
DDX56-208ENST00000467318 KCNQ1P51787 676 aa15.3■□□□□ 0.04
DDX56-208ENST00000467318 ATXN1P54253 815 aaKnown RBP15.3■□□□□ 0.04
DDX56-208ENST00000467318 ZNF77Q15935 545 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms