RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 KCNK9Q9NPC2 374 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 EURLQ9NYK6 297 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 RRN3Q9NYV6 651 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.89■□□□□ 0.61
COL9A3-205ENST00000466192 HCSTQ9UBK5 93 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 NUP205Q92621 2012 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 TNFRSF10BO14763 440 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 SSTR1P30872 391 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 IFNAR2P48551 515 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 ATN1P54259 1190 aaPredicted RBP18.88■□□□□ 0.61
COL9A3-205ENST00000466192 AIF1P55008 147 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 GPX6P59796 221 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 SCAPQ12770 1279 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 QPCTQ16769 361 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 BBS9Q3SYG4 887 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 VSTM1Q6UX27 236 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 SRRM1Q8IYB3 904 aaKnown RBP18.88■□□□□ 0.61
COL9A3-205ENST00000466192 PDIK1LQ8N165 341 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 CCDC110Q8TBZ0 833 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 MGARPQ8TDB4 240 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 MRRFQ96E11 262 aaKnown RBP18.88■□□□□ 0.61
COL9A3-205ENST00000466192 OLFM3Q96PB7 478 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 QKIQ96PU8 341 aaKnown RBP eCLIP18.88■□□□□ 0.61
COL9A3-205ENST00000466192 WDR83Q9BRX9 315 aaKnown RBP18.88■□□□□ 0.61
COL9A3-205ENST00000466192 COLEC11Q9BWP8 271 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 RAB6BQ9NRW1 208 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 CLUHO75153 1309 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 MICAL3Q7RTP6 2002 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 E7ESA3 106 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 SMAPO00193 183 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 MFSD11O43934 449 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 DGKIO75912 1065 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 CCL5P13501 91 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 BRAFP15056 766 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 SLC5A3P53794 718 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 IFRD2Q12894 506 aaPredicted RBP18.88■□□□□ 0.61
COL9A3-205ENST00000466192 DPYSQ14117 519 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 LRRC14Q15048 493 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 VARS2Q5ST30 1063 aaKnown RBP18.88■□□□□ 0.61
COL9A3-205ENST00000466192 CRIPAKQ8N1N5 446 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 NETO2Q8NC67 525 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 FBXO36Q8NEA4 188 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 PHACTR1Q9C0D0 580 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 ABI2Q9NYB9 513 aaPredicted RBP18.88■□□□□ 0.61
COL9A3-205ENST00000466192 ADAM28Q9UKQ2 775 aa18.88■□□□□ 0.61
COL9A3-205ENST00000466192 MYO1CO00159 1063 aa18.87■□□□□ 0.61
COL9A3-205ENST00000466192 EEF2KO00418 725 aaKnown RBP18.87■□□□□ 0.61
COL9A3-205ENST00000466192 CXCR3P49682 368 aa18.87■□□□□ 0.61
COL9A3-205ENST00000466192 SEMA3BQ13214 749 aa18.87■□□□□ 0.61
COL9A3-205ENST00000466192 RFX8Q6ZV50 586 aa18.87■□□□□ 0.61
COL9A3-205ENST00000466192 TAC4Q86UU9 113 aa18.87■□□□□ 0.61
COL9A3-205ENST00000466192 CHMP6Q96FZ7 201 aa18.87■□□□□ 0.61
COL9A3-205ENST00000466192 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-205ENST00000466192 RASA4BC9J798 803 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 SYN3O14994 580 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 RASA4O43374 803 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 F9P00740 461 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 PGFP49763 221 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 FAXCQ5TGI0 409 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 C3orf62Q6ZUJ4 267 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 CPLX4Q7Z7G2 160 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 RIBC1Q8N443 379 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-205ENST00000466192 ANKRD42Q8N9B4 389 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 DQX1Q8TE96 717 aaKnown RBP18.86■□□□□ 0.61
COL9A3-205ENST00000466192 APBB2Q92870 758 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 B3GALT6Q96L58 329 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 GPR62Q9BZJ7 368 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 PRDM16Q9HAZ2 1276 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 MLXIPLQ9NP71 852 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 MARCH5Q9NX47 278 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 LRFN2Q9ULH4 789 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 NR2E3Q9Y5X4 410 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 PLXNA3P51805 1871 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 CHADO15335 359 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 PIAS1O75925 651 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 CCL23P55773 120 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 FAM171A1Q5VUB5 890 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 TADA2BQ86TJ2 420 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 CEP57Q86XR8 500 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 SCN4BQ8IWT1 228 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 DCP1BQ8IZD4 617 aaKnown RBP18.86■□□□□ 0.61
COL9A3-205ENST00000466192 ATP11CQ8NB49 1132 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 MAML1Q92585 1016 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 ZNF317Q96PQ6 595 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-205ENST00000466192 LGMNQ99538 433 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 WDCPQ9H6R7 721 aa18.86■□□□□ 0.61
COL9A3-205ENST00000466192 ZMYND8Q9ULU4 1186 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-205ENST00000466192 MKI67P46013 3256 aaKnown RBP18.86■□□□□ 0.61
COL9A3-205ENST00000466192 SHROOM3Q8TF72 1996 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 DCLK1O15075 740 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 GCATO75600 419 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 VAV1P15498 845 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 SLC11A1P49279 550 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 YWHAGP61981 247 aaKnown RBP eCLIP18.85■□□□□ 0.61
COL9A3-205ENST00000466192 PALM2Q8IXS6 379 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 STKLD1Q8NE28 680 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 TFB1MQ8WVM0 346 aaKnown RBP18.85■□□□□ 0.61
COL9A3-205ENST00000466192 DYDC1Q8WWB3 177 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 TKTL2Q9H0I9 626 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 HIPK3Q9H422 1215 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms