RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 OSGEPQ9NPF4 335 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 RASAL2Q9UJF2 1139 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 AGO1Q9UL18 857 aaKnown RBP12.35□□□□□ -0.43
CNOT4-208ENST00000465721 ZNF510Q9Y2H8 683 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.35□□□□□ -0.43
CNOT4-208ENST00000465721 SNX11Q9Y5W9 270 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 USP3Q9Y6I4 520 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.34□□□□□ -0.43
CNOT4-208ENST00000465721 FAM149AA5PLN7 773 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 GOLGA8CPA6NN73 597 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 STX6O43752 255 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 HLA-DRAP01903 254 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 RPN1P04843 607 aaKnown RBP12.34□□□□□ -0.43
CNOT4-208ENST00000465721 EPHX1P07099 455 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 HMBSP08397 361 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 ACADMP11310 421 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 HLA-EP13747 358 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 ACSL1P33121 698 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 PIK3CAP42336 1068 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 GRIA4P48058 902 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 COG7P83436 770 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 EFEMP1Q12805 493 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 CAMK2GQ13555 558 aaPredicted RBP12.34□□□□□ -0.43
CNOT4-208ENST00000465721 CUL4BQ13620 913 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 SMAD1Q15797 465 aaKnown RBP12.34□□□□□ -0.43
CNOT4-208ENST00000465721 SERPINA13PQ6UXR4 307 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 TADA2BQ86TJ2 420 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 CPXM2Q8N436 756 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 KIAA0895Q8NCT3 520 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 SNX19Q92543 992 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 CYFIP2Q96F07 1278 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 DCLK3Q9C098 648 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 CIPCQ9C0C6 399 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 LHX5Q9H2C1 402 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 KCTD10Q9H3F6 313 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 APOBEC3GQ9HC16 384 aaKnown RBP12.34□□□□□ -0.43
CNOT4-208ENST00000465721 TM9SF3Q9HD45 589 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 MYO18BQ8IUG5 2567 aa12.34□□□□□ -0.43
CNOT4-208ENST00000465721 PVALEFA0A1B0GWK0 134 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 POLR2DO15514 142 aaKnown RBP12.33□□□□□ -0.44
CNOT4-208ENST00000465721 TNFSF14O43557 240 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 KLRC4O43908 158 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 PCDHGA12O60330 932 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 CUTAO60888 179 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 RALAP11233 206 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 HOXD9P28356 352 aaPredicted RBP12.33□□□□□ -0.44
CNOT4-208ENST00000465721 GRK6P43250 576 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 CCT8P50990 548 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 E2F5Q15329 346 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 DENND1CQ8IV53 801 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 PDCD7Q8N8D1 485 aaKnown RBP12.33□□□□□ -0.44
CNOT4-208ENST00000465721 ADAM32Q8TC27 787 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 TMC2Q8TDI7 906 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 IGSF8Q969P0 613 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 CDK5RAP1Q96SZ6 601 aaKnown RBP12.33□□□□□ -0.44
CNOT4-208ENST00000465721 ORAI3Q9BRQ5 295 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 NT5C1AQ9BXI3 368 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 DUSP16Q9BY84 665 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 SLC2A11Q9BYW1 496 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 TMEM245Q9H330 911 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 UPF2Q9HAU5 1272 aaKnown RBP12.33□□□□□ -0.44
CNOT4-208ENST00000465721 ANKRD6Q9Y2G4 727 aa12.33□□□□□ -0.44
CNOT4-208ENST00000465721 TDRD6O60522 2096 aaKnown RBP12.33□□□□□ -0.44
CNOT4-208ENST00000465721 H0Y8X5 98 aa12.32□□□□□ -0.44
CNOT4-208ENST00000465721 PAPSS1O43252 624 aaPredicted RBP12.32□□□□□ -0.44
CNOT4-208ENST00000465721 ZIC2O95409 532 aaPredicted RBP12.32□□□□□ -0.44
CNOT4-208ENST00000465721 YEATS4O95619 227 aa12.32□□□□□ -0.44
CNOT4-208ENST00000465721 SEMA4FO95754 770 aa12.32□□□□□ -0.44
CNOT4-208ENST00000465721 NR3C1P04150 777 aa12.32□□□□□ -0.44
CNOT4-208ENST00000465721 CYBBP04839 570 aa12.32□□□□□ -0.44
CNOT4-208ENST00000465721 TRIM21P19474 475 aaKnown RBP12.32□□□□□ -0.44
CNOT4-208ENST00000465721 HLA-FP30511 346 aa12.32□□□□□ -0.44
CNOT4-208ENST00000465721 CTSKP43235 329 aa12.32□□□□□ -0.44
CNOT4-208ENST00000465721 SUZ12Q15022 739 aaKnown RBP12.32□□□□□ -0.44
CNOT4-208ENST00000465721 KCNT1Q5JUK3 1230 aa12.32□□□□□ -0.44
CNOT4-208ENST00000465721 PPP1R26Q5T8A7 1209 aaPredicted RBP12.32□□□□□ -0.44
CNOT4-208ENST00000465721 DHRS13Q6UX07 377 aa12.32□□□□□ -0.44
CNOT4-208ENST00000465721 GRAMD1CQ8IYS0 662 aa12.32□□□□□ -0.44
CNOT4-208ENST00000465721 ZNF366Q8N895 744 aa12.32□□□□□ -0.44
CNOT4-208ENST00000465721 BIRC7Q96CA5 298 aa12.32□□□□□ -0.44
CNOT4-208ENST00000465721 NIF3L1Q9GZT8 377 aa12.32□□□□□ -0.44
CNOT4-208ENST00000465721 CYP3A43Q9HB55 503 aa12.32□□□□□ -0.44
CNOT4-208ENST00000465721 MARCH2Q9P0N8 246 aa12.32□□□□□ -0.44
CNOT4-208ENST00000465721 SLC12A8A0AV02 714 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 E9PAM4 449 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 KCNK3O14649 394 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 IKBKBO14920 756 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 TSPAN3O60637 253 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 C1QL1O75973 258 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 KIF20AO95235 890 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 CD58P19256 250 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 CD27P26842 260 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 AFMP43652 599 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 ABCG1P45844 678 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 IL9RQ01113 521 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 STK4Q13043 487 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 TEAD4Q15561 434 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 FNDC3BQ53EP0 1204 aaKnown RBP12.31□□□□□ -0.44
CNOT4-208ENST00000465721 CCDC157Q569K6 752 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 RAB41Q5JT25 222 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms