RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 FAM133BQ5BKY9 247 aaKnown RBP12.12□□□□□ -0.47
CUX1-207ENST00000465461 SH3PXD2AQ5TCZ1 1133 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 EMC10Q5UCC4 262 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 FYB2Q5VWT5 728 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 UNC45BQ8IWX7 931 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 ETFBKMTQ8IXQ9 262 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 MCOLN2Q8IZK6 566 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 PRSS33Q8NF86 280 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 DDI1Q8WTU0 396 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 RXFP2Q8WXD0 754 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 PNKPQ96T60 521 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 NPY6RQ99463 290 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 TRIM62Q9BVG3 475 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 SELENOOQ9BVL4 669 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 OSBPL6Q9BZF3 934 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 NUCKS1Q9H1E3 243 aaKnown RBP12.12□□□□□ -0.47
CUX1-207ENST00000465461 ANLNQ9NQW6 1124 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 PIGVQ9NUD9 493 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 SPATA6Q9NWH7 488 aaPredicted RBP12.12□□□□□ -0.47
CUX1-207ENST00000465461 ARHGAP20Q9P2F6 1191 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 ADAMTS1Q9UHI8 967 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 SNX10Q9Y5X0 201 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 F5P12259 2224 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 TCRBV5S1A1TA0A578 114 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 H0Y858 1186 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 K7EQS6 105 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 NCAM2O15394 837 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 RNF40O75150 1001 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 FTLP02792 175 aaPredicted RBP12.11□□□□□ -0.47
CUX1-207ENST00000465461 SERPING1P05155 500 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 CALB1P05937 261 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 KRT3P12035 628 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 GBP1P32455 592 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 RFC1P35251 1148 aaPredicted RBP12.11□□□□□ -0.47
CUX1-207ENST00000465461 CHKAP35790 457 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 SLC11A2P49281 568 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 ZNF75DP51815 510 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 RING1Q06587 406 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 CDO1Q16878 200 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 CCDC14Q49A88 953 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 ADGRF1Q5T601 910 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 RAP1GAP2Q684P5 730 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 NUGGCQ68CJ6 796 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 C1orf228Q6PIY5 440 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 WDR59Q6PJI9 974 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 TSSK4Q6SA08 328 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 FAM217AQ8IXS0 508 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 CFAP52Q8N1V2 620 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 PHTF2Q8N3S3 785 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 CPXM2Q8N436 756 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 SYN2Q92777 582 aaPredicted RBP12.11□□□□□ -0.47
CUX1-207ENST00000465461 PRICKLE1Q96MT3 831 aaPredicted RBP12.11□□□□□ -0.47
CUX1-207ENST00000465461 ARHGEF4Q9NR80 690 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 DNAJC17Q9NVM6 304 aaKnown RBP12.11□□□□□ -0.47
CUX1-207ENST00000465461 MARK1Q9P0L2 795 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 STIM2Q9P246 746 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 WDR35Q9P2L0 1181 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 STOML2Q9UJZ1 356 aa12.11□□□□□ -0.47
CUX1-207ENST00000465461 ZDBF2Q9HCK1 2354 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 A0A087X0T9 212 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 KCNU1A8MYU2 1149 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 I6L893 689 aaPredicted RBP12.1□□□□□ -0.47
CUX1-207ENST00000465461 GALR2O43603 387 aaPredicted RBP12.1□□□□□ -0.47
CUX1-207ENST00000465461 TBL1XO60907 577 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 KAT7O95251 611 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 ADCY5O95622 1261 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 PENKP01210 267 aaPredicted RBP12.1□□□□□ -0.47
CUX1-207ENST00000465461 APOEP02649 317 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 CYBBP04839 570 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 CISD3P0C7P0 127 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 FAM228BP0C875 321 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 PDGFRAP16234 1089 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 DRD1P21728 446 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 SCNN1AP37088 669 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 EIF4A3P38919 411 aaKnown RBP12.1□□□□□ -0.47
CUX1-207ENST00000465461 RPL7AP62424 266 aaKnown RBP12.1□□□□□ -0.47
CUX1-207ENST00000465461 DEUP1Q05D60 604 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 TCF15Q12870 199 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 TBX2Q13207 712 aaPredicted RBP12.1□□□□□ -0.47
CUX1-207ENST00000465461 LRRC32Q14392 662 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 SLC25A52Q3SY17 297 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 C2orf27AQ580R0 203 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 DGKKQ5KSL6 1271 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 PIK3R6Q5UE93 754 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 DNAJC24Q6P3W2 148 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 MAML2Q8IZL2 1156 aaPredicted RBP12.1□□□□□ -0.47
CUX1-207ENST00000465461 LGI2Q8N0V4 545 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 OR8K1Q8NGG5 319 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 NT5C3BQ969T7 300 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 IQCDQ96DY2 449 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 ERLEC1Q96DZ1 483 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 TMA16Q96EY4 203 aaKnown RBP12.1□□□□□ -0.47
CUX1-207ENST00000465461 MCEEQ96PE7 176 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 XPO6Q96QU8 1125 aaKnown RBP12.1□□□□□ -0.47
CUX1-207ENST00000465461 CHP1Q99653 195 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 MAGEB5Q9BZ81 275 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 CHRDQ9H2X0 955 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 ABHD10Q9NUJ1 306 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.1□□□□□ -0.47
CUX1-207ENST00000465461 DEC1Q9P2X7 70 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms