RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 FAM172AQ8WUF8 416 aa17.59■□□□□ 0.41
EXOSC3-203ENST00000465229 ING5Q8WYH8 240 aa17.59■□□□□ 0.41
EXOSC3-203ENST00000465229 PGAP3Q96FM1 320 aaPredicted RBP17.59■□□□□ 0.41
EXOSC3-203ENST00000465229 KRT12Q99456 494 aa17.59■□□□□ 0.41
EXOSC3-203ENST00000465229 TASP1Q9H6P5 420 aa17.59■□□□□ 0.41
EXOSC3-203ENST00000465229 DDIT4Q9NX09 232 aa17.59■□□□□ 0.41
EXOSC3-203ENST00000465229 MARCH2Q9P0N8 246 aa17.59■□□□□ 0.41
EXOSC3-203ENST00000465229 LCMT1Q9UIC8 334 aa17.59■□□□□ 0.41
EXOSC3-203ENST00000465229 CD207Q9UJ71 328 aa17.59■□□□□ 0.41
EXOSC3-203ENST00000465229 CLUHO75153 1309 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 CCDC66A2RUB6 948 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 SOBPA7XYQ1 873 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 KRIT1O00522 736 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 KCNA5P22460 613 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 DDX6P26196 483 aaKnown RBP eCLIP17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 PEX5P50542 639 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 ATXN1P54253 815 aaKnown RBP17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 HDAC4P56524 1084 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 NME3Q13232 169 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 NNTQ13423 1086 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 ACAP1Q15027 740 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 DCAF12L1Q5VU92 463 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 DAB2IPQ5VWQ8 1189 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 EMBQ6PCB8 327 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 MIB1Q86YT6 1006 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 RIPOR3Q96MK2 946 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 ZSWIM3Q96MP5 696 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 NACA2Q9H009 215 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 FAM204AQ9H8W3 233 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 RASAL2Q9UJF2 1139 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 UNC80Q8N2C7 3258 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 C2orf16Q68DN1 1984 aa17.58■□□□□ 0.41
EXOSC3-203ENST00000465229 ANAPC1Q9H1A4 1944 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 SYNJ2BP-COX16A0A087WUM0 186 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 TRAV19A0A0A6YYK7 116 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 BHMG1C9JSJ3 638 aaPredicted RBP17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 IRAK2O43187 625 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 MSI1O43347 362 aaKnown RBP17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 LRCH4O75427 683 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 PFKLP17858 780 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 COMTP21964 271 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 GBP1P32455 592 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 MAN1A1P33908 653 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 CTNNA1P35221 906 aaKnown RBP17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 MTHFRP42898 656 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 DEUP1Q05D60 604 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 CMTM8Q8IZV2 173 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 SUSD6Q92537 303 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 SERPINB11Q96P15 392 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 PIGVQ9NUD9 493 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 COX16Q9P0S2 106 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 USTQ9Y2C2 406 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 PCDHA3Q9Y5H8 950 aa17.58■□□□□ 0.4
EXOSC3-203ENST00000465229 RNF8O76064 485 aa17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 HEXIM1O94992 359 aaKnown RBP17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 F9P00740 461 aa17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 MYBL2P10244 700 aa17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 MBL2P11226 248 aaPredicted RBP17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 RDXP35241 583 aaKnown RBP17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 SLC1A1P43005 524 aa17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 SLC7A9P82251 487 aa17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 SLC7A5Q01650 507 aa17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 NPAS3Q8IXF0 933 aa17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 ALG3Q92685 438 aa17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 FGF13Q92913 245 aa17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 HLA-CQ95604 372 aa17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 CAVIN3Q969G5 261 aa17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 ZFRQ96KR1 1074 aaKnown RBP17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 KLF16Q9BXK1 252 aaPredicted RBP17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 GKN1Q9NS71 199 aa17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 ZMYM5Q9UJ78 669 aa17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 USP15Q9Y4E8 981 aaPredicted RBP17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 COL6A3P12111 3177 aa17.57■□□□□ 0.4
EXOSC3-203ENST00000465229 SLC12A8A0AV02 714 aa17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 FGGP02679 453 aa17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 CKMP06732 381 aa17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 TCF4P15884 667 aa17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 DESP17661 470 aa17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 MIPP30301 263 aa17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 PCK1P35558 622 aa17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 CXCR3P49682 368 aa17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 ZXDBP98169 803 aa17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 TRIP4Q15650 581 aaPredicted RBP17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 GET4Q7L5D6 327 aaPredicted RBP17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 MAATS1Q7Z4T9 603 aa17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 CCDC26Q8TAB7 109 aa17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 SLC39A13Q96H72 371 aa17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 POMKQ9H5K3 350 aa17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 SMPD4Q9NXE4 827 aa17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 TLR6Q9Y2C9 796 aa17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 HBS1LQ9Y450 684 aaKnown RBP17.56■□□□□ 0.4
EXOSC3-203ENST00000465229 DENND4CQ5VZ89 1909 aa17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 GOLGA6L10A0A0M3HER8 536 aa17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 GRXCR2A6NFK2 248 aa17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 RAD51CO43502 376 aa17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 AVPR1AP37288 418 aa17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 KPNA1P52294 538 aaPredicted RBP17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 TBX4P57082 545 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms