RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 SLC2A13Q96QE2 648 aa23.06■■□□□ 1.28
UBA3-206ENST00000464605 ERGIC2Q96RQ1 377 aa23.06■■□□□ 1.28
UBA3-206ENST00000464605 ASNSD1Q9NWL6 643 aa23.06■■□□□ 1.28
UBA3-206ENST00000464605 LAMA1P25391 3075 aa23.06■■□□□ 1.28
UBA3-206ENST00000464605 CKAP5Q14008 2032 aa23.06■■□□□ 1.28
UBA3-206ENST00000464605 NUP205Q92621 2012 aa23.06■■□□□ 1.28
UBA3-206ENST00000464605 GOLGA6L7A0A1B0GV03 622 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 AXIN1O15169 862 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 TSPAN3O60637 253 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 GLI1P08151 1106 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 CDK11BP21127 795 aaKnown RBP23.05■■□□□ 1.28
UBA3-206ENST00000464605 HOXD9P28356 352 aaPredicted RBP23.05■■□□□ 1.28
UBA3-206ENST00000464605 SLC6A4P31645 630 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 SGSHP51688 502 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 SIM2Q14190 667 aaPredicted RBP23.05■■□□□ 1.28
UBA3-206ENST00000464605 GEN1Q17RS7 908 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 MPPE1Q53F39 396 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 TAF3Q5VWG9 929 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 EGFLAMQ63HQ2 1017 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 NUGGCQ68CJ6 796 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 RNF43Q68DV7 783 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 NADSYN1Q6IA69 706 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 UNC45BQ8IWX7 931 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 ZNF513Q8N8E2 541 aaPredicted RBP23.05■■□□□ 1.28
UBA3-206ENST00000464605 ANKRD20A12PQ8NF67 263 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 DDI1Q8WTU0 396 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 ACOX2Q99424 681 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 TRIM62Q9BVG3 475 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 NAT10Q9H0A0 1025 aaKnown RBP23.05■■□□□ 1.28
UBA3-206ENST00000464605 NLRC4Q9NPP4 1024 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 DLL3Q9NYJ7 618 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 NOCTQ9UK39 431 aaKnown RBP23.05■■□□□ 1.28
UBA3-206ENST00000464605 CEP192Q8TEP8 1941 aa23.05■■□□□ 1.28
UBA3-206ENST00000464605 ACSL4O60488 711 aa23.04■■□□□ 1.28
UBA3-206ENST00000464605 TRUB2O95900 331 aaKnown RBP23.04■■□□□ 1.28
UBA3-206ENST00000464605 TGM1P22735 817 aa23.04■■□□□ 1.28
UBA3-206ENST00000464605 DGKEP52429 567 aa23.04■■□□□ 1.28
UBA3-206ENST00000464605 UBXN1Q04323 297 aa23.04■■□□□ 1.28
UBA3-206ENST00000464605 LPAL2Q16609 132 aa23.04■■□□□ 1.28
UBA3-206ENST00000464605 EOGTQ5NDL2 527 aa23.04■■□□□ 1.28
UBA3-206ENST00000464605 PIK3R6Q5UE93 754 aa23.04■■□□□ 1.28
UBA3-206ENST00000464605 NUDT18Q6ZVK8 323 aa23.04■■□□□ 1.28
UBA3-206ENST00000464605 DEFB106AQ8N104 65 aa23.04■■□□□ 1.28
UBA3-206ENST00000464605 GPR161Q8N6U8 529 aaKnown RBP23.04■■□□□ 1.28
UBA3-206ENST00000464605 TMEM35BQ8NCS4 154 aa23.04■■□□□ 1.28
UBA3-206ENST00000464605 TSTD1Q8NFU3 115 aa23.04■■□□□ 1.28
UBA3-206ENST00000464605 GAB3Q8WWW8 586 aa23.04■■□□□ 1.28
UBA3-206ENST00000464605 NOX5Q96PH1 765 aa23.04■■□□□ 1.28
UBA3-206ENST00000464605 CD248Q9HCU0 757 aa23.04■■□□□ 1.28
UBA3-206ENST00000464605 DAAM1Q9Y4D1 1078 aa23.04■■□□□ 1.28
UBA3-206ENST00000464605 CAPN9O14815 690 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 IRAK2O43187 625 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 GFPT2O94808 682 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 CYBBP04839 570 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 MMEP08473 750 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 CHRNB2P17787 502 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 SOX5P35711 763 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 GABRB2P47870 512 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 SLC6A3Q01959 620 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 PUM1Q14671 1186 aaKnown RBP eCLIP23.03■■□□□ 1.28
UBA3-206ENST00000464605 IQCB1Q15051 598 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 EFHC1Q5JVL4 640 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 OR6B2Q6IFH4 312 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 RFWD3Q6PCD5 774 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 PRR23BQ6ZRT6 265 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 MDGA1Q8NFP4 955 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 SLC20A1Q8WUM9 679 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 TMA16Q96EY4 203 aaKnown RBP23.03■■□□□ 1.28
UBA3-206ENST00000464605 MYEOVQ96EZ4 313 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 SLC2A11Q9BYW1 496 aa23.03■■□□□ 1.28
UBA3-206ENST00000464605 XPO7Q9UIA9 1087 aaKnown RBP23.03■■□□□ 1.28
UBA3-206ENST00000464605 TEX33O43247 280 aa23.02■■□□□ 1.28
UBA3-206ENST00000464605 HSF2BPO75031 334 aa23.02■■□□□ 1.28
UBA3-206ENST00000464605 GRAP2O75791 330 aa23.02■■□□□ 1.28
UBA3-206ENST00000464605 RPP40O75818 363 aaKnown RBP23.02■■□□□ 1.28
UBA3-206ENST00000464605 SLC11A2P49281 568 aa23.02■■□□□ 1.28
UBA3-206ENST00000464605 ZNF165P49910 485 aa23.02■■□□□ 1.28
UBA3-206ENST00000464605 ZNF445P59923 1031 aa23.02■■□□□ 1.28
UBA3-206ENST00000464605 DCAF6Q58WW2 860 aa23.02■■□□□ 1.28
UBA3-206ENST00000464605 ZC3H12AQ5D1E8 599 aaKnown RBP23.02■■□□□ 1.28
UBA3-206ENST00000464605 TMEM215Q68D42 235 aa23.02■■□□□ 1.28
UBA3-206ENST00000464605 SLC26A9Q7LBE3 791 aa23.02■■□□□ 1.28
UBA3-206ENST00000464605 ZNF397Q8NF99 534 aaPredicted RBP23.02■■□□□ 1.28
UBA3-206ENST00000464605 IRX2Q9BZI1 471 aaPredicted RBP23.02■■□□□ 1.28
UBA3-206ENST00000464605 CEP83Q9Y592 693 aa23.02■■□□□ 1.28
UBA3-206ENST00000464605 DNAH14Q0VDD8 3507 aa23.02■■□□□ 1.27
UBA3-206ENST00000464605 A0A1W2PQF6 199 aa23.01■■□□□ 1.27
UBA3-206ENST00000464605 SYCE3A1L190 88 aa23.01■■□□□ 1.27
UBA3-206ENST00000464605 NTSR1P30989 418 aa23.01■■□□□ 1.27
UBA3-206ENST00000464605 WASP42768 502 aa23.01■■□□□ 1.27
UBA3-206ENST00000464605 NOMO3P69849 1222 aa23.01■■□□□ 1.27
UBA3-206ENST00000464605 FMO1Q01740 532 aa23.01■■□□□ 1.27
UBA3-206ENST00000464605 LAIR1Q6GTX8 287 aa23.01■■□□□ 1.27
UBA3-206ENST00000464605 ANO7Q6IWH7 933 aa23.01■■□□□ 1.27
UBA3-206ENST00000464605 TRMT11Q7Z4G4 463 aaKnown RBP23.01■■□□□ 1.27
UBA3-206ENST00000464605 IPO4Q8TEX9 1081 aaKnown RBP23.01■■□□□ 1.27
UBA3-206ENST00000464605 PRICKLE1Q96MT3 831 aaPredicted RBP23.01■■□□□ 1.27
UBA3-206ENST00000464605 GABRG3Q99928 467 aa23.01■■□□□ 1.27
UBA3-206ENST00000464605 ADAM33Q9BZ11 813 aa23.01■■□□□ 1.27
UBA3-206ENST00000464605 RTN4Q9NQC3 1192 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms