RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 SERTAD1Q9UHV2 236 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 EIF2B4Q9UI10 523 aaKnown RBP18.11■□□□□ 0.49
HMGN1-210ENST00000464078 STRIP2Q9ULQ0 834 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 CLEC4EQ9ULY5 219 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 GOLGA4Q13439 2230 aaKnown RBP18.1■□□□□ 0.49
HMGN1-210ENST00000464078 CALUO43852 315 aaPredicted RBP18.1■□□□□ 0.49
HMGN1-210ENST00000464078 EPHX1P07099 455 aa18.1■□□□□ 0.49
HMGN1-210ENST00000464078 ACADMP11310 421 aa18.1■□□□□ 0.49
HMGN1-210ENST00000464078 GCLMP48507 274 aa18.1■□□□□ 0.49
HMGN1-210ENST00000464078 MCCD1P59942 119 aaPredicted RBP18.1■□□□□ 0.49
HMGN1-210ENST00000464078 PPP3CAQ08209 521 aa18.1■□□□□ 0.49
HMGN1-210ENST00000464078 TMEM215Q68D42 235 aa18.1■□□□□ 0.49
HMGN1-210ENST00000464078 SPRYD3Q8NCJ5 442 aa18.1■□□□□ 0.49
HMGN1-210ENST00000464078 OR2T3Q8NH03 318 aa18.1■□□□□ 0.49
HMGN1-210ENST00000464078 CIPCQ9C0C6 399 aa18.1■□□□□ 0.49
HMGN1-210ENST00000464078 FBRSQ9HAH7 460 aa18.1■□□□□ 0.49
HMGN1-210ENST00000464078 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.1■□□□□ 0.49
HMGN1-210ENST00000464078 URB1O60287 2271 aaKnown RBP18.09■□□□□ 0.49
HMGN1-210ENST00000464078 KIF20AO95235 890 aa18.09■□□□□ 0.49
HMGN1-210ENST00000464078 TRIM49P0CI25 452 aa18.09■□□□□ 0.49
HMGN1-210ENST00000464078 TRIM49CP0CI26 452 aa18.09■□□□□ 0.49
HMGN1-210ENST00000464078 ZSCAN22P10073 491 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-210ENST00000464078 NR2F2P24468 414 aa18.09■□□□□ 0.49
HMGN1-210ENST00000464078 HOXD9P28356 352 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-210ENST00000464078 ZNF445P59923 1031 aa18.09■□□□□ 0.49
HMGN1-210ENST00000464078 TRIP4Q15650 581 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-210ENST00000464078 COL28A1Q2UY09 1125 aa18.09■□□□□ 0.49
HMGN1-210ENST00000464078 C19orf48Q6RUI8 117 aa18.09■□□□□ 0.49
HMGN1-210ENST00000464078 RSRC2Q7L4I2 434 aaKnown RBP18.09■□□□□ 0.49
HMGN1-210ENST00000464078 PIGZQ86VD9 579 aa18.09■□□□□ 0.49
HMGN1-210ENST00000464078 CACUL1Q86Y37 369 aa18.09■□□□□ 0.49
HMGN1-210ENST00000464078 CCDC150Q8NCX0 1101 aa18.09■□□□□ 0.49
HMGN1-210ENST00000464078 MDM1Q8TC05 714 aa18.09■□□□□ 0.49
HMGN1-210ENST00000464078 TMEM245Q9H330 911 aa18.09■□□□□ 0.49
HMGN1-210ENST00000464078 TMEM8AQ9HCN3 771 aa18.09■□□□□ 0.49
HMGN1-210ENST00000464078 USP25Q9UHP3 1055 aa18.09■□□□□ 0.49
HMGN1-210ENST00000464078 TMEM131Q92545 1883 aa18.09■□□□□ 0.49
HMGN1-210ENST00000464078 A0A1B0GVT2 93 aa18.08■□□□□ 0.48
HMGN1-210ENST00000464078 F13A1P00488 732 aa18.08■□□□□ 0.48
HMGN1-210ENST00000464078 HMBSP08397 361 aa18.08■□□□□ 0.48
HMGN1-210ENST00000464078 ATXN1LP0C7T5 689 aaKnown RBP18.08■□□□□ 0.48
HMGN1-210ENST00000464078 GRIA4P48058 902 aa18.08■□□□□ 0.48
HMGN1-210ENST00000464078 YWHAGP61981 247 aaKnown RBP eCLIP18.08■□□□□ 0.48
HMGN1-210ENST00000464078 MPPE1Q53F39 396 aa18.08■□□□□ 0.48
HMGN1-210ENST00000464078 SOWAHCQ53LP3 525 aaPredicted RBP18.08■□□□□ 0.48
HMGN1-210ENST00000464078 ARHGAP17Q68EM7 881 aa18.08■□□□□ 0.48
HMGN1-210ENST00000464078 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.08■□□□□ 0.48
HMGN1-210ENST00000464078 WFIKKN2Q8TEU8 576 aa18.08■□□□□ 0.48
HMGN1-210ENST00000464078 DDI1Q8WTU0 396 aa18.08■□□□□ 0.48
HMGN1-210ENST00000464078 SORCS1Q8WY21 1168 aa18.08■□□□□ 0.48
HMGN1-210ENST00000464078 LHX5Q9H2C1 402 aa18.08■□□□□ 0.48
HMGN1-210ENST00000464078 STOML2Q9UJZ1 356 aa18.08■□□□□ 0.48
HMGN1-210ENST00000464078 RCOR1Q9UKL0 485 aa18.08■□□□□ 0.48
HMGN1-210ENST00000464078 SLC12A8A0AV02 714 aa18.07■□□□□ 0.48
HMGN1-210ENST00000464078 KRT13P13646 458 aa18.07■□□□□ 0.48
HMGN1-210ENST00000464078 HLA-FP30511 346 aa18.07■□□□□ 0.48
HMGN1-210ENST00000464078 GTF2H1P32780 548 aa18.07■□□□□ 0.48
HMGN1-210ENST00000464078 CSNK1EP49674 416 aaKnown RBP18.07■□□□□ 0.48
HMGN1-210ENST00000464078 ZBTB16Q05516 673 aa18.07■□□□□ 0.48
HMGN1-210ENST00000464078 SUZ12Q15022 739 aaKnown RBP18.07■□□□□ 0.48
HMGN1-210ENST00000464078 KIF19Q2TAC6 998 aa18.07■□□□□ 0.48
HMGN1-210ENST00000464078 PM20D1Q6GTS8 502 aa18.07■□□□□ 0.48
HMGN1-210ENST00000464078 FAM186BQ8IYM0 893 aa18.07■□□□□ 0.48
HMGN1-210ENST00000464078 GALNT15Q8N3T1 639 aa18.07■□□□□ 0.48
HMGN1-210ENST00000464078 SLC4A11Q8NBS3 891 aa18.07■□□□□ 0.48
HMGN1-210ENST00000464078 RHBDD1Q8TEB9 315 aa18.07■□□□□ 0.48
HMGN1-210ENST00000464078 HEXIM2Q96MH2 286 aaKnown RBP18.07■□□□□ 0.48
HMGN1-210ENST00000464078 C6orf106Q9H6K1 298 aaPredicted RBP18.07■□□□□ 0.48
HMGN1-210ENST00000464078 OLA1Q9NTK5 396 aaKnown RBP18.07■□□□□ 0.48
HMGN1-210ENST00000464078 CFAP45Q9UL16 551 aa18.07■□□□□ 0.48
HMGN1-210ENST00000464078 RAXQ9Y2V3 346 aa18.07■□□□□ 0.48
HMGN1-210ENST00000464078 HBS1LQ9Y450 684 aaKnown RBP18.07■□□□□ 0.48
HMGN1-210ENST00000464078 SLCO1B1Q9Y6L6 691 aa18.07■□□□□ 0.48
HMGN1-210ENST00000464078 KALRNO60229 2985 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 FLNBO75369 2602 aaKnown RBP18.06■□□□□ 0.48
HMGN1-210ENST00000464078 PCDHGA12O60330 932 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 LATS1O95835 1130 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 ZBED1O96006 694 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 HLA-EP13747 358 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 ACSL1P33121 698 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 GRK6P43250 576 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 TKTL1P51854 596 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 RAD23BP54727 409 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 SLC8A3P57103 927 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 ARID5AQ03989 594 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 TEAD4Q15561 434 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 ZNF394Q53GI3 561 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 FOXD4L5Q5VV16 416 aaPredicted RBP18.06■□□□□ 0.48
HMGN1-210ENST00000464078 KRT39Q6A163 491 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 BHLHA9Q7RTU4 235 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 KIAA0907Q7Z7F0 614 aaPredicted RBP18.06■□□□□ 0.48
HMGN1-210ENST00000464078 FAM124AQ86V42 546 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 ANKRD52Q8NB46 1076 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 FOXD4L4Q8WXT5 416 aaPredicted RBP18.06■□□□□ 0.48
HMGN1-210ENST00000464078 SNX19Q92543 992 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 IGSF8Q969P0 613 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 TMEM176AQ96HP8 235 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 TM9SF3Q9HD45 589 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 CISHQ9NSE2 258 aa18.06■□□□□ 0.48
HMGN1-210ENST00000464078 BTBD3Q9Y2F9 522 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms