RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SPATA6Q9NWH7 488 aaPredicted RBP18.4■□□□□ 0.54
VPS52-214ENST00000463486 TAS2R14Q9NYV8 317 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 PLK2Q9NYY3 685 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 XPO7Q9UIA9 1087 aaKnown RBP18.4■□□□□ 0.54
VPS52-214ENST00000463486 ATG2BQ96BY7 2078 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 ACSL4O60488 711 aa18.39■□□□□ 0.53
VPS52-214ENST00000463486 RNF40O75150 1001 aa18.39■□□□□ 0.53
VPS52-214ENST00000463486 CCDC172P0C7W6 258 aa18.39■□□□□ 0.53
VPS52-214ENST00000463486 GRIA2P42262 883 aa18.39■□□□□ 0.53
VPS52-214ENST00000463486 SGSHP51688 502 aa18.39■□□□□ 0.53
VPS52-214ENST00000463486 PTPN5P54829 565 aa18.39■□□□□ 0.53
VPS52-214ENST00000463486 GSCP56915 257 aaPredicted RBP18.39■□□□□ 0.53
VPS52-214ENST00000463486 CDK17Q00537 523 aa18.39■□□□□ 0.53
VPS52-214ENST00000463486 ASIC2Q16515 512 aa18.39■□□□□ 0.53
VPS52-214ENST00000463486 FBXO43Q4G163 708 aa18.39■□□□□ 0.53
VPS52-214ENST00000463486 FAM102AQ5T9C2 384 aaPredicted RBP18.39■□□□□ 0.53
VPS52-214ENST00000463486 SYN2Q92777 582 aaPredicted RBP18.39■□□□□ 0.53
VPS52-214ENST00000463486 C11orf70Q9BRQ4 267 aa18.39■□□□□ 0.53
VPS52-214ENST00000463486 POLR3BQ9NW08 1133 aaPredicted RBP18.39■□□□□ 0.53
VPS52-214ENST00000463486 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.39■□□□□ 0.53
VPS52-214ENST00000463486 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.38■□□□□ 0.53
VPS52-214ENST00000463486 GOLGA8SH3BPF8 625 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 I6L893 689 aaPredicted RBP18.38■□□□□ 0.53
VPS52-214ENST00000463486 DDX3XO00571 662 aaKnown RBP eCLIP18.38■□□□□ 0.539e-9■□□□□ 9.1
VPS52-214ENST00000463486 PAPSS2O95340 614 aaPredicted RBP18.38■□□□□ 0.53
VPS52-214ENST00000463486 SKILP12757 684 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 KIR2DL1P43626 348 aaPredicted RBP18.38■□□□□ 0.53
VPS52-214ENST00000463486 RNASE9P60153 205 aaKnown RBP18.38■□□□□ 0.53
VPS52-214ENST00000463486 ZBED6P86452 979 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 SATB1Q01826 763 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 PIK3R6Q5UE93 754 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 ACAD10Q6JQN1 1059 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 RFWD3Q6PCD5 774 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 PHLDB2Q86SQ0 1253 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 USP33Q8TEY7 942 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 BHMTQ93088 406 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 EXOC4Q96A65 974 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 IQCDQ96DY2 449 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 PGAP3Q96FM1 320 aaPredicted RBP18.38■□□□□ 0.53
VPS52-214ENST00000463486 RBSNQ9H1K0 784 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 ARHGEF4Q9NR80 690 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 PIGVQ9NUD9 493 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.38■□□□□ 0.53
VPS52-214ENST00000463486 DDIT4Q9NX09 232 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 ADAM22Q9P0K1 906 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 DEC1Q9P2X7 70 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 FBXO4Q9UKT5 387 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 ZFHX2Q9C0A1 2572 aaPredicted RBP18.38■□□□□ 0.53
VPS52-214ENST00000463486 PIEZO1Q92508 2521 aa18.38■□□□□ 0.53
VPS52-214ENST00000463486 K7ESF4 209 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 TSPAN3O60637 253 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 ENDOD1O94919 500 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 GJB6O95452 261 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 SP9P0CG40 484 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 HOXD9P28356 352 aaPredicted RBP18.37■□□□□ 0.53
VPS52-214ENST00000463486 TNFRSF4P43489 277 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 NSFP46459 744 aaKnown RBP18.37■□□□□ 0.53
VPS52-214ENST00000463486 SLC11A2P49281 568 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 KDSRQ06136 332 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 C1QBPQ07021 282 aaKnown RBP18.37■□□□□ 0.53
VPS52-214ENST00000463486 SLC25A52Q3SY17 297 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 PPP1R15BQ5SWA1 713 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 ARTNQ5T4W7 220 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 EMC10Q5UCC4 262 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 SARM1Q6SZW1 724 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 VSTM4Q8IW00 320 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 EMC1Q8N766 993 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 TERB1Q8NA31 727 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 MSANTD4Q8NCY6 345 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 JOSD2Q8TAC2 188 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 CPLX3Q8WVH0 158 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 PRICKLE1Q96MT3 831 aaPredicted RBP18.37■□□□□ 0.53
VPS52-214ENST00000463486 PRMT1Q99873 361 aaKnown RBP18.37■□□□□ 0.53
VPS52-214ENST00000463486 IRX2Q9BZI1 471 aaPredicted RBP18.37■□□□□ 0.53
VPS52-214ENST00000463486 FAM204AQ9H8W3 233 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 ANLNQ9NQW6 1124 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 DNAJC17Q9NVM6 304 aaKnown RBP18.37■□□□□ 0.53
VPS52-214ENST00000463486 RRN3Q9NYV6 651 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 SLC27A6Q9Y2P4 619 aa18.37■□□□□ 0.53
VPS52-214ENST00000463486 USP34Q70CQ2 3546 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 PRRT4C9JH25 899 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 M0QYT0 321 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 LAMTOR5O43504 91 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 TNFAIP3P21580 790 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 HNRNPH3P31942 346 aaKnown RBP18.36■□□□□ 0.53
VPS52-214ENST00000463486 CASP14P31944 242 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 CXCL12P48061 93 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 CXCR3P49682 368 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 NHLH1Q02575 133 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 KLHL30Q0D2K2 578 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 PPP2R5DQ14738 602 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 ARID5BQ14865 1188 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 ZNF528Q3MIS6 628 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 MPPE1Q53F39 396 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 RAB6CQ53S08 254 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 TSSK4Q6SA08 328 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 MCOLN2Q8IZK6 566 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 TMA16Q96EY4 203 aaKnown RBP18.36■□□□□ 0.53
VPS52-214ENST00000463486 BTN2A3PQ96KV6 586 aa18.36■□□□□ 0.53
VPS52-214ENST00000463486 XPO6Q96QU8 1125 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms