RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 DDIT4Q9NX09 232 aa14.99□□□□□ -0.01
HDAC6-213ENST00000462730 RRN3Q9NYV6 651 aa14.99□□□□□ -0.01
HDAC6-213ENST00000462730 RAG1P15918 1043 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 GRIK1P39086 918 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 GAD2Q05329 585 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 SLC10A2Q12908 348 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 LONRF1Q17RB8 773 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 CTXN3Q4LDR2 81 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 PM20D1Q6GTS8 502 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 ZNF280DQ6N043 979 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 CENPUQ71F23 418 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 SCML4Q8N228 414 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 ARFGAP2Q8N6H7 521 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 BCL7CQ8WUZ0 217 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 RTP4Q96DX8 246 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 ROPN1BQ9BZX4 212 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 ROPN1Q9HAT0 212 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 WDR6Q9NNW5 1121 aaKnown RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 ARHGEF4Q9NR80 690 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 ABI2Q9NYB9 513 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 TCRBV7S3A2A0A539 114 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 KIAA0355O15063 1070 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 CREB3O43889 395 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 KIAA0754O94854 1291 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 TMEM63AO94886 807 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 FGFR3P22607 806 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 ADRA1BP35368 520 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 MDH1P40925 334 aaKnown RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 NR2C2P49116 596 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 ARL4CP56559 192 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 PPP2R2AP63151 447 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 IFRD2Q12894 506 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 PDIA2Q13087 525 aaKnown RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 XRCC4Q13426 336 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 MRPL58Q14197 206 aaKnown RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 FASTKD3Q14CZ7 662 aaKnown RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 HIF1AQ16665 826 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 HP1BP3Q5SSJ5 553 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 FAM182AQ5T1J6 154 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 BSPRYQ5W0U4 402 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 CCDC91Q7Z6B0 441 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 TMCO2Q7Z6W1 182 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 DCP1BQ8IZD4 617 aaKnown RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 CCDC33Q8N5R6 958 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 SCAMP5Q8TAC9 235 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 NTAN1Q96AB6 310 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 TTC25Q96NG3 672 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 QKIQ96PU8 341 aaKnown RBP eCLIP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 SLC9A7Q96T83 725 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 MYCBPQ99417 103 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 PAK5Q9P286 719 aa14.98□□□□□ -0.01
HDAC6-213ENST00000462730 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.98□□□□□ -0.01
HDAC6-213ENST00000462730 ABHD14A-ACY1A0A1B0GW23 586 aa14.97□□□□□ -0.01
HDAC6-213ENST00000462730 EEF2KO00418 725 aaKnown RBP14.97□□□□□ -0.01
HDAC6-213ENST00000462730 BANF1O75531 89 aa14.97□□□□□ -0.01
HDAC6-213ENST00000462730 ABHD2P08910 425 aa14.97□□□□□ -0.01
HDAC6-213ENST00000462730 SLC5A3P53794 718 aa14.97□□□□□ -0.01
HDAC6-213ENST00000462730 AIF1P55008 147 aa14.97□□□□□ -0.01
HDAC6-213ENST00000462730 DEFB103AP81534 67 aa14.97□□□□□ -0.01
HDAC6-213ENST00000462730 ELAVL2Q12926 359 aaKnown RBP14.97□□□□□ -0.01
HDAC6-213ENST00000462730 AUHQ13825 339 aaKnown RBP14.97□□□□□ -0.01
HDAC6-213ENST00000462730 SLC45A4Q5BKX6 768 aa14.97□□□□□ -0.01
HDAC6-213ENST00000462730 RTP2Q5QGT7 225 aa14.97□□□□□ -0.01
HDAC6-213ENST00000462730 TAC4Q86UU9 113 aa14.97□□□□□ -0.01
HDAC6-213ENST00000462730 SCN4BQ8IWT1 228 aa14.97□□□□□ -0.01
HDAC6-213ENST00000462730 ZNF473Q8WTR7 871 aaKnown RBP14.97□□□□□ -0.01
HDAC6-213ENST00000462730 TOP1MTQ969P6 601 aa14.97□□□□□ -0.01
HDAC6-213ENST00000462730 PGAP3Q96FM1 320 aaPredicted RBP14.97□□□□□ -0.01
HDAC6-213ENST00000462730 PRDM16Q9HAZ2 1276 aa14.97□□□□□ -0.01
HDAC6-213ENST00000462730 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.97□□□□□ -0.01
HDAC6-213ENST00000462730 DTLQ9NZJ0 730 aa14.97□□□□□ -0.01
HDAC6-213ENST00000462730 XPO7Q9UIA9 1087 aaKnown RBP14.97□□□□□ -0.01
HDAC6-213ENST00000462730 FBXW11Q9UKB1 542 aa14.97□□□□□ -0.01
HDAC6-213ENST00000462730 MYO16Q9Y6X6 1858 aa14.97□□□□□ -0.01
HDAC6-213ENST00000462730 SRRM3A6NNA2 597 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-213ENST00000462730 SMAPO00193 183 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 MFSD11O43934 449 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 AGTP01019 485 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 ALDH7A1P49419 539 aaKnown RBP14.96□□□□□ -0.01
HDAC6-213ENST00000462730 IFI35P80217 286 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-213ENST00000462730 PPARDQ03181 441 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 SCAPQ12770 1279 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 NFE2Q16621 373 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-213ENST00000462730 FNBP1LQ5T0N5 605 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 MFSD5Q6N075 450 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 FAM117BQ6P1L5 589 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 KCNT2Q6UVM3 1135 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 MICALCLQ6ZW33 695 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 CCDC13Q8IYE1 715 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 ZBED8Q8IZ13 594 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 OTUD6BQ8N6M0 293 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 PGLYRP2Q96PD5 576 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 STMN4Q9H169 189 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-213ENST00000462730 CWH43Q9H720 699 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 ANLNQ9NQW6 1124 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 COL4A4P53420 1690 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-213ENST00000462730 ALOX15BO15296 676 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 F9P00740 461 aa14.96□□□□□ -0.01
HDAC6-213ENST00000462730 AMHP03971 560 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms