RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 ERBB2P04626 1255 aa23.4■■□□□ 1.34
TRAF4-207ENST00000461195 ATP1A3P13637 1013 aa23.4■■□□□ 1.34
TRAF4-207ENST00000461195 CDH5P33151 784 aaPredicted RBP23.4■■□□□ 1.34
TRAF4-207ENST00000461195 TAF5Q15542 800 aa23.4■■□□□ 1.34
TRAF4-207ENST00000461195 PTPN20Q4JDL3 420 aa23.4■■□□□ 1.34
TRAF4-207ENST00000461195 TAF3Q5VWG9 929 aa23.4■■□□□ 1.34
TRAF4-207ENST00000461195 OR6B2Q6IFH4 312 aa23.4■■□□□ 1.34
TRAF4-207ENST00000461195 FAM183BPQ6ZVS7 135 aa23.4■■□□□ 1.34
TRAF4-207ENST00000461195 CEP68Q76N32 757 aa23.4■■□□□ 1.34
TRAF4-207ENST00000461195 NOP9Q86U38 636 aaKnown RBP23.4■■□□□ 1.34
TRAF4-207ENST00000461195 DHX40Q8IX18 779 aaKnown RBP23.4■■□□□ 1.34
TRAF4-207ENST00000461195 NEK11Q8NG66 645 aa23.4■■□□□ 1.34
TRAF4-207ENST00000461195 GAB3Q8WWW8 586 aa23.4■■□□□ 1.34
TRAF4-207ENST00000461195 DDX1Q92499 740 aaKnown RBP23.4■■□□□ 1.34
TRAF4-207ENST00000461195 SPAG5Q96R06 1193 aa23.4■■□□□ 1.34
TRAF4-207ENST00000461195 ERGIC2Q96RQ1 377 aa23.4■■□□□ 1.34
TRAF4-207ENST00000461195 SLC2A11Q9BYW1 496 aa23.4■■□□□ 1.34
TRAF4-207ENST00000461195 NLRC4Q9NPP4 1024 aa23.4■■□□□ 1.34
TRAF4-207ENST00000461195 PRRT4C9JH25 899 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 GFRA2O00451 464 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 ACSL4O60488 711 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 HSF2BPO75031 334 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 ADAM23O75077 832 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 RPP40O75818 363 aaKnown RBP23.39■■□□□ 1.33
TRAF4-207ENST00000461195 GFPT2O94808 682 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 SOX5P35711 763 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 ZNF165P49910 485 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 JAM2P57087 298 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 DCAF6Q58WW2 860 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 OLFML1Q6UWY5 402 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 TMEM92Q6UXU6 159 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 EPS8L1Q8TE68 723 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 TMA16Q96EY4 203 aaKnown RBP23.39■■□□□ 1.33
TRAF4-207ENST00000461195 SLC39A13Q96H72 371 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 SLC2A13Q96QE2 648 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 FUCA2Q9BTY2 467 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 IRX2Q9BZI1 471 aaPredicted RBP23.39■■□□□ 1.33
TRAF4-207ENST00000461195 POLMQ9NP87 494 aaPredicted RBP23.39■■□□□ 1.33
TRAF4-207ENST00000461195 HCN2Q9UL51 889 aa23.39■■□□□ 1.33
TRAF4-207ENST00000461195 IRAK2O43187 625 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 ALDH1A2O94788 518 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 LSM8O95777 96 aaKnown RBP23.38■■□□□ 1.33
TRAF4-207ENST00000461195 TRUB2O95900 331 aaKnown RBP23.38■■□□□ 1.33
TRAF4-207ENST00000461195 IGLV3-25P01717 112 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 HOXD9P28356 352 aaPredicted RBP23.38■■□□□ 1.33
TRAF4-207ENST00000461195 NTSR1P30989 418 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 SLC6A3Q01959 620 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 LPAL2Q16609 132 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 EGFLAMQ63HQ2 1017 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 LAIR1Q6GTX8 287 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 RASSF3Q86WH2 238 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 ZNF677Q86XU0 584 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 ZDHHC17Q8IUH5 632 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 KIAA2013Q8IYS2 634 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 DEFB106AQ8N104 65 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 DDX50Q9BQ39 737 aaKnown RBP23.38■■□□□ 1.33
TRAF4-207ENST00000461195 GMEB2Q9UKD1 530 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 CLEC4EQ9ULY5 219 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 OTOGLQ3ZCN5 2332 aa23.38■■□□□ 1.33
TRAF4-207ENST00000461195 GRAP2O75791 330 aa23.37■■□□□ 1.33
TRAF4-207ENST00000461195 APOEP02649 317 aa23.37■■□□□ 1.33
TRAF4-207ENST00000461195 MMEP08473 750 aa23.37■■□□□ 1.33
TRAF4-207ENST00000461195 HNRNPLP14866 589 aaKnown RBP eCLIP23.37■■□□□ 1.33
TRAF4-207ENST00000461195 STAT1P42224 750 aa23.37■■□□□ 1.33
TRAF4-207ENST00000461195 CDK17Q00537 523 aa23.37■■□□□ 1.33
TRAF4-207ENST00000461195 GEN1Q17RS7 908 aa23.37■■□□□ 1.33
TRAF4-207ENST00000461195 FAM133BQ5BKY9 247 aaKnown RBP23.37■■□□□ 1.33
TRAF4-207ENST00000461195 SDE2Q6IQ49 451 aa23.37■■□□□ 1.33
TRAF4-207ENST00000461195 ANO7Q6IWH7 933 aa23.37■■□□□ 1.33
TRAF4-207ENST00000461195 SLC26A9Q7LBE3 791 aa23.37■■□□□ 1.33
TRAF4-207ENST00000461195 ANKS1BQ7Z6G8 1248 aa23.37■■□□□ 1.33
TRAF4-207ENST00000461195 DCLK2Q8N568 766 aa23.37■■□□□ 1.33
TRAF4-207ENST00000461195 GOLGA6L7A0A1B0GV03 622 aa23.36■■□□□ 1.33
TRAF4-207ENST00000461195 SYCE3A1L190 88 aa23.36■■□□□ 1.33
TRAF4-207ENST00000461195 SLC6A4P31645 630 aa23.36■■□□□ 1.33
TRAF4-207ENST00000461195 PITX1P78337 314 aaPredicted RBP23.36■■□□□ 1.33
TRAF4-207ENST00000461195 PIK3R6Q5UE93 754 aa23.36■■□□□ 1.33
TRAF4-207ENST00000461195 NADSYN1Q6IA69 706 aa23.36■■□□□ 1.33
TRAF4-207ENST00000461195 RFWD3Q6PCD5 774 aa23.36■■□□□ 1.33
TRAF4-207ENST00000461195 CACNA2D4Q7Z3S7 1137 aa23.36■■□□□ 1.33
TRAF4-207ENST00000461195 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.36■■□□□ 1.33
TRAF4-207ENST00000461195 ERICH1Q86X53 443 aa23.36■■□□□ 1.33
TRAF4-207ENST00000461195 CHPFQ8IZ52 775 aa23.36■■□□□ 1.33
TRAF4-207ENST00000461195 MSANTD4Q8NCY6 345 aa23.36■■□□□ 1.33
TRAF4-207ENST00000461195 ZNF397Q8NF99 534 aaPredicted RBP23.36■■□□□ 1.33
TRAF4-207ENST00000461195 MDGA1Q8NFP4 955 aa23.36■■□□□ 1.33
TRAF4-207ENST00000461195 RMDN1Q96DB5 314 aa23.36■■□□□ 1.33
TRAF4-207ENST00000461195 C18orf8Q96DM3 657 aa23.36■■□□□ 1.33
TRAF4-207ENST00000461195 FAM204AQ9H8W3 233 aa23.36■■□□□ 1.33
TRAF4-207ENST00000461195 NOCTQ9UK39 431 aaKnown RBP23.36■■□□□ 1.33
TRAF4-207ENST00000461195 DAB1O75553 588 aa23.35■■□□□ 1.33
TRAF4-207ENST00000461195 MOCS2O96007 188 aaPredicted RBP23.35■■□□□ 1.33
TRAF4-207ENST00000461195 HOXB2P14652 356 aa23.35■■□□□ 1.33
TRAF4-207ENST00000461195 GBP1P32455 592 aa23.35■■□□□ 1.33
TRAF4-207ENST00000461195 WASP42768 502 aa23.35■■□□□ 1.33
TRAF4-207ENST00000461195 GABRB2P47870 512 aa23.35■■□□□ 1.33
TRAF4-207ENST00000461195 SGSHP51688 502 aa23.35■■□□□ 1.33
TRAF4-207ENST00000461195 CDR2Q01850 454 aa23.35■■□□□ 1.33
TRAF4-207ENST00000461195 EIF4EBP2Q13542 120 aaPredicted RBP23.35■■□□□ 1.33
TRAF4-207ENST00000461195 ZC3H12AQ5D1E8 599 aaKnown RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms