RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 GHRHRQ02643 423 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 NRN1LQ496H8 165 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 HSP90B2PQ58FF3 399 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 CRB2Q5IJ48 1285 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 CPLX2Q6PUV4 134 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 CCDC149Q6ZUS6 474 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 DENND1CQ8IV53 801 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 HSCBQ8IWL3 235 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 DIS3L2Q8IYB7 885 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 KRT222Q8N1A0 295 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 FAM184AQ8NB25 1140 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 MAFAQ8NHW3 353 aaPredicted RBP5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 NSUN6Q8TEA1 469 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 TBCKQ8TEA7 893 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 NRG4Q8WWG1 115 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 SNX21Q969T3 373 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 C8orf76Q96K31 380 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 TNIP3Q96KP6 325 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 GUCD1Q96NT3 240 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 DPYSL5Q9BPU6 564 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 BTBD2Q9BX70 525 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 NAA15Q9BXJ9 866 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 FTOQ9C0B1 505 aaKnown RBP eCLIP5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 C6orf50Q9HD87 102 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 KLHL11Q9NVR0 708 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 RSPH14Q9UHP6 348 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 PUF60Q9UHX1 559 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 INTUQ9ULD6 942 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 SUFUQ9UMX1 484 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 NR2E1Q9Y466 385 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 CDY2AQ9Y6F7 541 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 FRMPD3Q5JV73 1810 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 DNAH12Q6ZR08 3092 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 IGLV3-22A0A075B6J6 115 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 A0A087WWV3 80 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 ESYT2A0FGR8 921 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 CCDC154A6NI56 674 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 H0YHG0 523 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 CTIFO43310 598 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 SLC37A4O43826 429 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 CDKL5O76039 1030 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 UBXN7O94888 489 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 TFRCP02786 760 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 MMP1P03956 469 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 TPM3P06753 285 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 MYL3P08590 195 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 TXNP10599 105 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 SERPINB3P29508 390 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 CCND2P30279 289 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 KRT2P35908 639 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 TOB1P50616 345 aaPredicted RBP5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 RRADP55042 308 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 PRMT2P55345 433 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 PSMC6P62333 389 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 TNFAIP2Q03169 654 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 ARHGAP1Q07960 439 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 ABHD18Q0P651 414 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 MALLQ13021 153 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 ITGB3BPQ13352 177 aaPredicted RBP5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 FHL2Q14192 279 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 ARHGEF6Q15052 776 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 PPP2R5BQ15173 497 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 STXBP2Q15833 593 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 KIAA0753Q2KHM9 967 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 LRIT3Q3SXY7 679 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 PRR16Q569H4 304 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 TRIM68Q6AZZ1 485 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 TOGARAM2Q6ZUX3 1019 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 TXLNBQ8N3L3 684 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 FBXO18Q8NFZ0 1043 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 U2AF1L4Q8WU68 220 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 AFG1LQ8WV93 481 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 GAB3Q8WWW8 586 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 CRYGNQ8WXF5 182 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 CFHR4Q92496 578 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 EXTL1Q92935 676 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 LENG9Q96B70 501 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 ZBTB10Q96DT7 871 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 LLPHQ9BRT6 129 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 TMEM60Q9H2L4 133 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 MTG2Q9H4K7 406 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 ADD3Q9UEY8 706 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 CNPY2Q9Y2B0 182 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 IPPQ9Y573 584 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 UBIAD1Q9Y5Z9 338 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 CDH23Q9H251 3354 aa5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 TRIP12Q14669 1992 aaPredicted RBP5.24□□□□□ -1.57
ATPAF1-203ENST00000460928 FRMPD4Q14CM0 1322 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 SYNRGQ9UMZ2 1314 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 ALPK3Q96L96 1907 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 PMS2P1A4D2B8 440 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 ASB14A6NK59 587 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 HMGB1P1B2RPK0 211 aaPredicted RBP5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 FAM227AF5H4B4 570 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 MSH4O15457 936 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 SEPT4O43236 478 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 CCP110O43303 1012 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 CHMP2AO43633 222 aa5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 NARSO43776 548 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-203ENST00000460928 B3GALT2O43825 422 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms