RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 NT5C1B-RDH14C9J2C7 533 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 FSCN2O14926 492 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 SYN3O14994 580 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 PRPSAP2O60256 369 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 PHF2O75151 1096 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 GLI1P08151 1106 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 RAG1P15918 1043 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 IL1R2P27930 398 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 CHRNA3P32297 505 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 PCK1P35558 622 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 SCNN1AP37088 669 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 PBX3P40426 434 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 SLC11A1P49279 550 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 RABGGTBP53611 331 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 CACNA2D1P54289 1103 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 GUCY2DQ02846 1103 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 BCL2A1Q16548 175 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 CCDC14Q49A88 953 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 NEPROQ6NW34 567 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 C4orf50Q6ZRC1 276 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 SPATA2LQ8IUW3 424 aaPredicted RBP10.74□□□□□ -0.69
HERC4-207ENST00000460168 PRELID2Q8N945 189 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 GIPC2Q8TF65 315 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 FAM172AQ8WUF8 416 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 KHSRPQ92945 711 aaKnown RBP eCLIP10.74□□□□□ -0.692e-6■■□□□ 11.4
HERC4-207ENST00000460168 ASIC4Q96FT7 647 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 OSBPL8Q9BZF1 889 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 EPB41L5Q9HCM4 733 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 KIAA1522Q9P206 1035 aaPredicted RBP10.74□□□□□ -0.69
HERC4-207ENST00000460168 R3HDM2Q9Y2K5 976 aaKnown RBP10.74□□□□□ -0.69
HERC4-207ENST00000460168 SF3B1O75533 1304 aaKnown RBP eCLIP10.74□□□□□ -0.698e-9■■■■■ 155.1
HERC4-207ENST00000460168 FNDC1Q4ZHG4 1894 aaPredicted RBP10.74□□□□□ -0.69
HERC4-207ENST00000460168 ZSCAN5CA6NGD5 496 aaPredicted RBP10.74□□□□□ -0.69
HERC4-207ENST00000460168 HSF2BPO75031 334 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 OAZ2O95190 189 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 TIMP1P01033 207 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 RARAP10276 462 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 CSF2RAP15509 400 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 ALDH3A1P30838 453 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 HALP42357 657 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 ALDH7A1P49419 539 aaKnown RBP10.74□□□□□ -0.69
HERC4-207ENST00000460168 NDUFV1P49821 464 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 MRPS5P82675 430 aaKnown RBP10.74□□□□□ -0.69
HERC4-207ENST00000460168 DR1Q01658 176 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 SCYL2Q6P3W7 929 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 CCDC137Q6PK04 289 aaKnown RBP10.74□□□□□ -0.69
HERC4-207ENST00000460168 MFSD7Q6UXD7 560 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 LRRTM3Q86VH5 581 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 IFT20Q8IY31 132 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 ZDHHC14Q8IZN3 488 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 ZMIZ2Q8NF64 920 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 HNRNPLLQ8WVV9 542 aaKnown RBP10.74□□□□□ -0.69
HERC4-207ENST00000460168 RAPGEF5Q92565 580 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 HSPH1Q92598 858 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 ABHD8Q96I13 439 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 C1orf74Q96LT6 269 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 SLITRK1Q96PX8 696 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 IER2Q9BTL4 223 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 CLK4Q9HAZ1 481 aaKnown RBP10.74□□□□□ -0.69
HERC4-207ENST00000460168 DMAP1Q9NPF5 467 aaPredicted RBP10.74□□□□□ -0.69
HERC4-207ENST00000460168 TMEM30AQ9NV96 361 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 TMLHEQ9NVH6 421 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 ZFATQ9P243 1243 aa10.74□□□□□ -0.69
HERC4-207ENST00000460168 ESYT3A0FGR9 886 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 TRIM43BA6NCK2 446 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 DPYSL4O14531 572 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 FBXO21O94952 628 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 GALTP07902 379 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 OR4Q2P0C623 313 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 KRT10P13645 584 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 ITGB8P26012 769 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 CCT5P48643 541 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 COPS2P61201 443 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 YWHAZP63104 245 aaKnown RBP10.73□□□□□ -0.69
HERC4-207ENST00000460168 PLOD1Q02809 727 aaPredicted RBP10.73□□□□□ -0.69
HERC4-207ENST00000460168 SLC39A12Q504Y0 691 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 TFDP3Q5H9I0 405 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 VARS2Q5ST30 1063 aaKnown RBP10.73□□□□□ -0.69
HERC4-207ENST00000460168 FUT10Q6P4F1 479 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 B4GALNT4Q76KP1 1039 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 ARCQ7LC44 396 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 GRAMD2AQ8IUY3 354 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 TMEM151BQ8IW70 566 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 CCDC105Q8IYK2 499 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 DCP1BQ8IZD4 617 aaKnown RBP10.73□□□□□ -0.69
HERC4-207ENST00000460168 KCTD6Q8NC69 237 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 NDRG1Q92597 394 aaKnown RBP10.73□□□□□ -0.69
HERC4-207ENST00000460168 B3GALT6Q96L58 329 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 CEP295NLQ96MC4 621 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 PKMYT1Q99640 499 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 CCT7Q99832 543 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 TMEM175Q9BSA9 504 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 GPR62Q9BZJ7 368 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 ULBP1Q9BZM6 244 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 CSNK1G1Q9HCP0 422 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 TCF7L2Q9NQB0 619 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 MARCH5Q9NX47 278 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.73□□□□□ -0.69
HERC4-207ENST00000460168 STK39Q9UEW8 545 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 UTP11Q9Y3A2 253 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms