RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 CCR1P32246 355 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 GJA4P35212 333 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 CHKAP35790 457 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 GALCP54803 685 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 VCPP55072 806 aaKnown RBP11.28□□□□□ -0.6
CCDC12-204ENST00000460035 RPL7AP62424 266 aaKnown RBP11.28□□□□□ -0.6
CCDC12-204ENST00000460035 GAD2Q05329 585 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 MAMLD1Q13495 774 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 SLC18A3Q16572 532 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 CDO1Q16878 200 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 PPP1R15BQ5SWA1 713 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 OTUD1Q5VV17 481 aaPredicted RBP11.28□□□□□ -0.6
CCDC12-204ENST00000460035 PLEKHA7Q6IQ23 1121 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 TRNP1Q6NT89 227 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 BNIPLQ7Z465 357 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 RALGPS2Q86X27 583 aaPredicted RBP11.28□□□□□ -0.6
CCDC12-204ENST00000460035 FAM217AQ8IXS0 508 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 NAT16Q8N8M0 369 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 ATP6V0D2Q8N8Y2 350 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 FAM3CQ92520 227 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 BHMTQ93088 406 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 AZIN2Q96A70 460 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 PBXIP1Q96AQ6 731 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 PGAP3Q96FM1 320 aaPredicted RBP11.28□□□□□ -0.6
CCDC12-204ENST00000460035 MSANTD3Q96H12 275 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 DDX50Q9BQ39 737 aaKnown RBP11.28□□□□□ -0.6
CCDC12-204ENST00000460035 THAP2Q9H0W7 228 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 WDCPQ9H6R7 721 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 TBC1D17Q9HA65 648 aa11.28□□□□□ -0.6
CCDC12-204ENST00000460035 MRPL47Q9HD33 250 aaKnown RBP11.28□□□□□ -0.6
CCDC12-204ENST00000460035 NYNRINQ9P2P1 1898 aaKnown RBP11.27□□□□□ -0.6
CCDC12-204ENST00000460035 MUC3AQ02505 3323 aa11.27□□□□□ -0.6
CCDC12-204ENST00000460035 FAM86C2PA6NEL3 165 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 NEDD8-MDP1E9PL57 170 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 PDGFBP01127 241 aaPredicted RBP11.27□□□□□ -0.61
CCDC12-204ENST00000460035 CYBBP04839 570 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 CYP17A1P05093 508 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 H2AFZP0C0S5 128 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 ADH5P11766 374 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 CTHP32929 405 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 RDXP35241 583 aaKnown RBP11.27□□□□□ -0.61
CCDC12-204ENST00000460035 PTPN9P43378 593 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 CXCR3P49682 368 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 MRE11P49959 708 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 GALK1P51570 392 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 STARD6P59095 220 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 UBXN2BQ14CS0 331 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 PON2Q15165 354 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 C15orf59Q2T9L4 293 aaPredicted RBP11.27□□□□□ -0.61
CCDC12-204ENST00000460035 ADGRF1Q5T601 910 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 SH3PXD2AQ5TCZ1 1133 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 C1orf228Q6PIY5 440 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 ZNF852Q6ZMS4 543 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 H2AFVQ71UI9 128 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 TMTC1Q8IUR5 882 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 DDI1Q8WTU0 396 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 ANP32BQ92688 251 aaKnown RBP11.27□□□□□ -0.61
CCDC12-204ENST00000460035 TMA16Q96EY4 203 aaKnown RBP11.27□□□□□ -0.61
CCDC12-204ENST00000460035 BTN2A3PQ96KV6 586 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 BBS2Q9BXC9 721 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 PIGVQ9NUD9 493 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 PLK2Q9NYY3 685 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 CALCOCO1Q9P1Z2 691 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 STOML2Q9UJZ1 356 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 NDRG2Q9UN36 371 aaKnown RBP11.27□□□□□ -0.61
CCDC12-204ENST00000460035 MRPS17Q9Y2R5 130 aaKnown RBP11.27□□□□□ -0.61
CCDC12-204ENST00000460035 PAXBP1Q9Y5B6 917 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 SCINQ9Y6U3 715 aa11.27□□□□□ -0.61
CCDC12-204ENST00000460035 CKAP5Q14008 2032 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 FANCMQ8IYD8 2048 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 KANSL1LA0AUZ9 987 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 TMEM191CA6NGB0 347 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 FAM170BA6NMN3 283 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 KCNU1A8MYU2 1149 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 ENDOD1O94919 500 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 PSMA2P25787 234 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 CYLC1P35663 651 aaPredicted RBP11.26□□□□□ -0.61
CCDC12-204ENST00000460035 MAGEA1P43355 309 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 SLC6A11P48066 632 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 ZNF143P52747 638 aaPredicted RBP11.26□□□□□ -0.61
CCDC12-204ENST00000460035 ATXN1P54253 815 aaKnown RBP11.26□□□□□ -0.61
CCDC12-204ENST00000460035 MTA1Q13330 715 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 PPP2R5DQ14738 602 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 SPA17Q15506 151 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 MPPE1Q53F39 396 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 RAP1GAP2Q684P5 730 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 NADSYN1Q6IA69 706 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 SCYL2Q6P3W7 929 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 RFWD3Q6PCD5 774 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 TXNDC11Q6PKC3 985 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 FAM131BQ86XD5 332 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 CCDC170Q8IYT3 715 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 LGI2Q8N0V4 545 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 PIAS4Q8N2W9 510 aaPredicted RBP11.26□□□□□ -0.61
CCDC12-204ENST00000460035 CPXM2Q8N436 756 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 FAM172AQ8WUF8 416 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 CTNNBL1Q8WYA6 563 aaPredicted RBP11.26□□□□□ -0.61
CCDC12-204ENST00000460035 EXOC4Q96A65 974 aa11.26□□□□□ -0.61
CCDC12-204ENST00000460035 XPO6Q96QU8 1125 aaKnown RBP11.26□□□□□ -0.61
CCDC12-204ENST00000460035 NELL2Q99435 816 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms