RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 SLC39A11Q8N1S5 342 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 PRELID2Q8N945 189 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 BBOF1Q8ND07 529 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 ATL2Q8NHH9 583 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 RIN2Q8WYP3 895 aaPredicted RBP9.29□□□□□ -0.92
VPS50-207ENST00000458530 NT5C3BQ969T7 300 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 PGAP3Q96FM1 320 aaPredicted RBP9.29□□□□□ -0.92
VPS50-207ENST00000458530 SPATA17Q96L03 361 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 CCDC114Q96M63 670 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 TMEM209Q96SK2 561 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 CDK5RAP1Q96SZ6 601 aaKnown RBP9.29□□□□□ -0.92
VPS50-207ENST00000458530 KCNK16Q96T55 309 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 PNKPQ96T60 521 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 NPY6RQ99463 290 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 C11orf84Q9BUA3 381 aaPredicted RBP9.29□□□□□ -0.92
VPS50-207ENST00000458530 SNRNP25Q9BV90 132 aaKnown RBP9.29□□□□□ -0.92
VPS50-207ENST00000458530 DCLK3Q9C098 648 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 IRF2BPLQ9H1B7 796 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 FAM204AQ9H8W3 233 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 GDF3Q9NR23 364 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.29□□□□□ -0.92
VPS50-207ENST00000458530 CHST7Q9NS84 486 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 ABCC13Q9NSE7 274 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 OLA1Q9NTK5 396 aaKnown RBP9.29□□□□□ -0.92
VPS50-207ENST00000458530 TMLHEQ9NVH6 421 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 KLHL11Q9NVR0 708 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 CLEC1BQ9P126 229 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 AMACRQ9UHK6 382 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 CD207Q9UJ71 328 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 AP4E1Q9UPM8 1137 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 SCML2Q9UQR0 700 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 RWDD3Q9Y3V2 267 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 USP3Q9Y6I4 520 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 NCOR2Q9Y618 2525 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 MTMR11A4FU01 709 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 YJEFN3A6XGL0 299 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 NT5C1B-RDH14C9J2C7 533 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 E7ENQ6 273 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 H3BRJ5 948 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 APOC4-APOC2K7ER74 178 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 M0QYT0 321 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 MCF2LO15068 1137 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 LINC01565O15544 149 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 TTI1O43156 1089 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 APOC2P02655 101 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 OR4Q2P0C623 313 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 TCF4P15884 667 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 TGM2P21980 687 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 CYP2F1P24903 491 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 IL1R2P27930 398 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 DRG2P55039 364 aaKnown RBP9.28□□□□□ -0.92
VPS50-207ENST00000458530 VCPP55072 806 aaKnown RBP9.28□□□□□ -0.92
VPS50-207ENST00000458530 ARPP19P56211 112 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 HDAC4P56524 1084 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 YWHAGP61981 247 aaKnown RBP eCLIP9.28□□□□□ -0.92
VPS50-207ENST00000458530 SLC7A5Q01650 507 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 DSG1Q02413 1049 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 SIGLEC14Q08ET2 396 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 GPS2Q13227 327 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 HLTFQ14527 1009 aaKnown RBP eCLIP9.28□□□□□ -0.92
VPS50-207ENST00000458530 SIX1Q15475 284 aaPredicted RBP9.28□□□□□ -0.92
VPS50-207ENST00000458530 DPYSL2Q16555 572 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 MGAT5BQ3V5L5 792 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 KCNT1Q5JUK3 1230 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 RTP2Q5QGT7 225 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 KAZNQ674X7 775 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 TPGS2Q68CL5 300 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 CCNI2Q6ZMN8 369 aaPredicted RBP9.28□□□□□ -0.92
VPS50-207ENST00000458530 CEP128Q6ZU80 1094 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 BZW1Q7L1Q6 419 aaKnown RBP9.28□□□□□ -0.92
VPS50-207ENST00000458530 ERMP1Q7Z2K6 904 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 GPRIN1Q7Z2K8 1008 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 HDXQ7Z353 690 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 TADA2BQ86TJ2 420 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 DDX53Q86TM3 631 aaKnown RBP9.28□□□□□ -0.92
VPS50-207ENST00000458530 MON1AQ86VX9 555 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 JAMLQ86YT9 394 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 RNF168Q8IYW5 571 aaPredicted RBP9.28□□□□□ -0.92
VPS50-207ENST00000458530 FIBCD1Q8N539 461 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 ARFGAP1Q8N6T3 406 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 CCDC89Q8N998 374 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 SLC7A14Q8TBB6 771 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 RNF139Q8WU17 664 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 RAPGEF5Q92565 580 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 NTAN1Q96AB6 310 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 HAUS1Q96CS2 278 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 FERMT1Q9BQL6 677 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 ERP44Q9BS26 406 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 HEMGNQ9BXL5 484 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 TSPYL1Q9H0U9 437 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 EPB41L5Q9HCM4 733 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 MTRF1LQ9UGC7 380 aaKnown RBP9.28□□□□□ -0.92
VPS50-207ENST00000458530 AFF4Q9UHB7 1163 aaKnown RBP9.28□□□□□ -0.92
VPS50-207ENST00000458530 MRPL42Q9Y6G3 142 aaKnown RBP9.28□□□□□ -0.92
VPS50-207ENST00000458530 PLXNA4Q9HCM2 1894 aa9.28□□□□□ -0.92
VPS50-207ENST00000458530 CACNA1BQ00975 2339 aa9.27□□□□□ -0.92
VPS50-207ENST00000458530 MTCL1Q9Y4B5 1905 aaKnown RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 CFAP69A5D8W1 941 aa9.27□□□□□ -0.93
VPS50-207ENST00000458530 C3orf70A6NLC5 250 aaPredicted RBP9.27□□□□□ -0.93
VPS50-207ENST00000458530 TNFRSF10BO14763 440 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms