RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 EOGTQ5NDL2 527 aa19.43■□□□□ 0.7
USP39-209ENST00000458268 FAM102AQ5T9C2 384 aaPredicted RBP19.43■□□□□ 0.7
USP39-209ENST00000458268 APTXQ7Z2E3 356 aaKnown RBP19.43■□□□□ 0.7
USP39-209ENST00000458268 CHPFQ8IZ52 775 aa19.43■□□□□ 0.7
USP39-209ENST00000458268 CPXM2Q8N436 756 aa19.43■□□□□ 0.7
USP39-209ENST00000458268 MSANTD4Q8NCY6 345 aa19.43■□□□□ 0.7
USP39-209ENST00000458268 NELL1Q92832 810 aa19.43■□□□□ 0.7
USP39-209ENST00000458268 FCRL2Q96LA5 508 aaPredicted RBP19.43■□□□□ 0.7
USP39-209ENST00000458268 CIPCQ9C0C6 399 aa19.43■□□□□ 0.7
USP39-209ENST00000458268 SEMA4AQ9H3S1 761 aa19.43■□□□□ 0.7
USP39-209ENST00000458268 DDIT4Q9NX09 232 aa19.43■□□□□ 0.7
USP39-209ENST00000458268 CLEC4EQ9ULY5 219 aa19.43■□□□□ 0.7
USP39-209ENST00000458268 PRRT4C9JH25 899 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 GOLGA6L19H0YKK7 550 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 AXIN1O15169 862 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 TBL1XO60907 577 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 HSF2BPO75031 334 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 PENKP01210 267 aaPredicted RBP19.42■□□□□ 0.7
USP39-209ENST00000458268 KIR2DL1P43626 348 aaPredicted RBP19.42■□□□□ 0.7
USP39-209ENST00000458268 SGSHP51688 502 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 JAM2P57087 298 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 SLC6A3Q01959 620 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 ZSCAN23Q3MJ62 389 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 ADGRF1Q5T601 910 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 OLFML1Q6UWY5 402 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.42■□□□□ 0.7
USP39-209ENST00000458268 WDR5BQ86VZ2 330 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 CHSY1Q86X52 802 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 DCLK2Q8N568 766 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 HMGB4Q8WW32 186 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 DDX1Q92499 740 aaKnown RBP19.42■□□□□ 0.7
USP39-209ENST00000458268 C18orf8Q96DM3 657 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 ERGIC2Q96RQ1 377 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 ACOX2Q99424 681 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 TLR6Q9Y2C9 796 aa19.42■□□□□ 0.7
USP39-209ENST00000458268 TCRBV21S2A2A0A5A6 115 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 TYW5A2RUC4 315 aaKnown RBP19.41■□□□□ 0.7
USP39-209ENST00000458268 IRAK2O43187 625 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 HRO43593 1189 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 LILRB5O75023 590 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 DAB1O75553 588 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 IGLV3-27P01718 113 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 CISD3P0C7P0 127 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 HOXB2P14652 356 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 SLC6A4P31645 630 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 GBP1P32455 592 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 IQCB1Q15051 598 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 GEN1Q17RS7 908 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 SKOR2Q2VWA4 1001 aaPredicted RBP19.41■□□□□ 0.7
USP39-209ENST00000458268 RAP1GAP2Q684P5 730 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 NADSYN1Q6IA69 706 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 SDE2Q6IQ49 451 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 TMEM92Q6UXU6 159 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 MMS22LQ6ZRQ5 1243 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 TRMT11Q7Z4G4 463 aaKnown RBP19.41■□□□□ 0.7
USP39-209ENST00000458268 ANKS1BQ7Z6G8 1248 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 CAMKK1Q8N5S9 505 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 POLMQ9NP87 494 aaPredicted RBP19.41■□□□□ 0.7
USP39-209ENST00000458268 RTN4Q9NQC3 1192 aaKnown RBP19.41■□□□□ 0.7
USP39-209ENST00000458268 CACNA2D2Q9NY47 1150 aa19.41■□□□□ 0.7
USP39-209ENST00000458268 XPO7Q9UIA9 1087 aaKnown RBP19.41■□□□□ 0.7
USP39-209ENST00000458268 NOCTQ9UK39 431 aaKnown RBP19.41■□□□□ 0.7
USP39-209ENST00000458268 PIEZO1Q92508 2521 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 RPP40O75818 363 aaKnown RBP19.4■□□□□ 0.7
USP39-209ENST00000458268 ALDH1A2O94788 518 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 LATS1O95835 1130 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 HNRNPLP14866 589 aaKnown RBP eCLIP19.4■□□□□ 0.7
USP39-209ENST00000458268 HOXD9P28356 352 aaPredicted RBP19.4■□□□□ 0.7
USP39-209ENST00000458268 SULT1E1P49888 294 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 NOMO3P69849 1222 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 CDR2Q01850 454 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 RING1Q06587 406 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 CRY1Q16526 586 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 FAM217AQ8IXS0 508 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 LGI2Q8N0V4 545 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 CFAP52Q8N1V2 620 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 CARNMT1Q8N4J0 409 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 SUMF1Q8NBK3 374 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 SLC30A5Q8TAD4 765 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 DDX50Q9BQ39 737 aaKnown RBP19.4■□□□□ 0.7
USP39-209ENST00000458268 C11orf70Q9BRQ4 267 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 NUCKS1Q9H1E3 243 aaKnown RBP19.4■□□□□ 0.7
USP39-209ENST00000458268 EPC1Q9H2F5 836 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 ASNSD1Q9NWL6 643 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 GMEB2Q9UKD1 530 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 RAD54BQ9Y620 910 aa19.4■□□□□ 0.7
USP39-209ENST00000458268 LRRC10BA6NIK2 292 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 M0QYT0 321 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 DCLK1O15075 740 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 ADAM23O75077 832 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 LSM8O95777 96 aaKnown RBP19.39■□□□□ 0.69
USP39-209ENST00000458268 GLI1P08151 1106 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 CHRNB2P17787 502 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 ABCB4P21439 1286 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 NTSR1P30989 418 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 NUMBP49757 651 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 FMO1Q01740 532 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 FAM133BQ5BKY9 247 aaKnown RBP19.39■□□□□ 0.69
USP39-209ENST00000458268 SLC26A9Q7LBE3 791 aa19.39■□□□□ 0.69
USP39-209ENST00000458268 ZNF677Q86XU0 584 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms