RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ZCCHC14Q8WYQ9 949 aaKnown RBP22.52■■□□□ 1.2
CPNE1-220ENST00000458038 P2RY11Q96G91 374 aa22.52■■□□□ 1.2
CPNE1-220ENST00000458038 GPR174Q9BXC1 333 aa22.52■■□□□ 1.2
CPNE1-220ENST00000458038 KIAA1257Q9ULG3 409 aa22.52■■□□□ 1.2
CPNE1-220ENST00000458038 COQ4Q9Y3A0 265 aa22.52■■□□□ 1.2
CPNE1-220ENST00000458038 WDFY3Q8IZQ1 3526 aa22.51■■□□□ 1.19
CPNE1-220ENST00000458038 METTL12A8MUP2 240 aa22.51■■□□□ 1.19
CPNE1-220ENST00000458038 XPO1O14980 1071 aaKnown RBP22.51■■□□□ 1.19
CPNE1-220ENST00000458038 LATS1O95835 1130 aa22.51■■□□□ 1.19
CPNE1-220ENST00000458038 SGO2Q562F6 1265 aa22.51■■□□□ 1.19
CPNE1-220ENST00000458038 IL27RAQ6UWB1 636 aa22.51■■□□□ 1.19
CPNE1-220ENST00000458038 RAB44Q7Z6P3 723 aaPredicted RBP22.51■■□□□ 1.19
CPNE1-220ENST00000458038 OR2I1PQ8NGU4 316 aa22.51■■□□□ 1.19
CPNE1-220ENST00000458038 IRX2Q9BZI1 471 aaPredicted RBP22.51■■□□□ 1.19
CPNE1-220ENST00000458038 CIPCQ9C0C6 399 aa22.51■■□□□ 1.19
CPNE1-220ENST00000458038 LRRC4Q9HBW1 653 aa22.51■■□□□ 1.19
CPNE1-220ENST00000458038 CD93Q9NPY3 652 aa22.51■■□□□ 1.19
CPNE1-220ENST00000458038 RMND1Q9NWS8 449 aa22.51■■□□□ 1.19
CPNE1-220ENST00000458038 KLK13Q9UKR3 277 aa22.51■■□□□ 1.19
CPNE1-220ENST00000458038 FREM2Q5SZK8 3169 aa22.5■■□□□ 1.19
CPNE1-220ENST00000458038 SRRM3A6NNA2 597 aaPredicted RBP22.5■■□□□ 1.19
CPNE1-220ENST00000458038 SH3BP5O60239 455 aa22.5■■□□□ 1.19
CPNE1-220ENST00000458038 ZNF883P0CG24 379 aa22.5■■□□□ 1.19
CPNE1-220ENST00000458038 MAOBP27338 520 aa22.5■■□□□ 1.19
CPNE1-220ENST00000458038 BST2Q10589 180 aaKnown RBP22.5■■□□□ 1.19
CPNE1-220ENST00000458038 GRIK2Q13002 908 aa22.5■■□□□ 1.19
CPNE1-220ENST00000458038 SERPINA13PQ6UXR4 307 aa22.5■■□□□ 1.19
CPNE1-220ENST00000458038 SCML4Q8N228 414 aa22.5■■□□□ 1.19
CPNE1-220ENST00000458038 RBBP8NLQ8NC74 664 aaPredicted RBP22.5■■□□□ 1.19
CPNE1-220ENST00000458038 WFIKKN2Q8TEU8 576 aa22.5■■□□□ 1.19
CPNE1-220ENST00000458038 RNF139Q8WU17 664 aa22.5■■□□□ 1.19
CPNE1-220ENST00000458038 TATDN2Q93075 761 aa22.5■■□□□ 1.19
CPNE1-220ENST00000458038 IPO9Q96P70 1041 aaKnown RBP22.5■■□□□ 1.19
CPNE1-220ENST00000458038 GTPBP4Q9BZE4 634 aaKnown RBP22.5■■□□□ 1.19
CPNE1-220ENST00000458038 FBRSQ9HAH7 460 aa22.5■■□□□ 1.19
CPNE1-220ENST00000458038 PLA2G4CQ9UP65 541 aa22.5■■□□□ 1.19
CPNE1-220ENST00000458038 KCNJ18B7U540 433 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 BCAT2O15382 392 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-220ENST00000458038 SLC16A3O15427 465 aaKnown RBP22.49■■□□□ 1.19
CPNE1-220ENST00000458038 CER1O95813 267 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 EPHX1P07099 455 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 C7P10643 843 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 COPAP53621 1224 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 FAM193AP78312 1265 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 COBLL1Q53SF7 1204 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 ADGRF1Q5T601 910 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 FMNL3Q8IVF7 1028 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 NAXDQ8IW45 347 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 CHCHD4Q8N4Q1 142 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 TSG101Q99816 390 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 ARID3AQ99856 593 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 ULBP1Q9BZM6 244 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 ABCC13Q9NSE7 274 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 STOML2Q9UJZ1 356 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 ZDHHC9Q9Y397 364 aa22.49■■□□□ 1.19
CPNE1-220ENST00000458038 VDRP11473 427 aa22.48■■□□□ 1.19
CPNE1-220ENST00000458038 FKBP3Q00688 224 aaKnown RBP22.48■■□□□ 1.19
CPNE1-220ENST00000458038 CAMK2GQ13555 558 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-220ENST00000458038 CUL2Q13617 745 aa22.48■■□□□ 1.19
CPNE1-220ENST00000458038 GOLGA7BQ2TAP0 167 aa22.48■■□□□ 1.19
CPNE1-220ENST00000458038 DCAF12L1Q5VU92 463 aa22.48■■□□□ 1.19
CPNE1-220ENST00000458038 TCERG1LQ5VWI1 586 aa22.48■■□□□ 1.19
CPNE1-220ENST00000458038 GLRX5Q86SX6 157 aa22.48■■□□□ 1.19
CPNE1-220ENST00000458038 OR2T3Q8NH03 318 aa22.48■■□□□ 1.19
CPNE1-220ENST00000458038 ADAMTS14Q8WXS8 1223 aa22.48■■□□□ 1.19
CPNE1-220ENST00000458038 KCTD13Q8WZ19 329 aa22.48■■□□□ 1.19
CPNE1-220ENST00000458038 TMA16Q96EY4 203 aaKnown RBP22.48■■□□□ 1.19
CPNE1-220ENST00000458038 CNGB3Q9NQW8 809 aa22.48■■□□□ 1.19
CPNE1-220ENST00000458038 TSPAN16Q9UKR8 245 aa22.48■■□□□ 1.19
CPNE1-220ENST00000458038 CLEC4EQ9ULY5 219 aa22.48■■□□□ 1.19
CPNE1-220ENST00000458038 APOBEC2Q9Y235 224 aaKnown RBP22.48■■□□□ 1.19
CPNE1-220ENST00000458038 SETSIPP0DME0 302 aa22.47■■□□□ 1.19
CPNE1-220ENST00000458038 TBXAS1P24557 533 aaPredicted RBP22.47■■□□□ 1.19
CPNE1-220ENST00000458038 PRKCHP24723 683 aa22.47■■□□□ 1.19
CPNE1-220ENST00000458038 HOXD9P28356 352 aaPredicted RBP22.47■■□□□ 1.19
CPNE1-220ENST00000458038 BSPRYQ5W0U4 402 aa22.47■■□□□ 1.19
CPNE1-220ENST00000458038 TMEM215Q68D42 235 aa22.47■■□□□ 1.19
CPNE1-220ENST00000458038 BHLHA9Q7RTU4 235 aa22.47■■□□□ 1.19
CPNE1-220ENST00000458038 SIX6OS1Q8N1H7 587 aa22.47■■□□□ 1.19
CPNE1-220ENST00000458038 ZCCHC9Q8N567 271 aaKnown RBP22.47■■□□□ 1.19
CPNE1-220ENST00000458038 ZNF557Q8N988 423 aaPredicted RBP22.47■■□□□ 1.19
CPNE1-220ENST00000458038 EEF2KMTQ96G04 330 aa22.47■■□□□ 1.19
CPNE1-220ENST00000458038 MIR1-1HGQ9H1L0 117 aa22.47■■□□□ 1.19
CPNE1-220ENST00000458038 GOLPH3LQ9H4A5 285 aa22.47■■□□□ 1.19
CPNE1-220ENST00000458038 NUMA1Q14980 2115 aa22.46■■□□□ 1.19
CPNE1-220ENST00000458038 ACACAQ13085 2346 aa22.46■■□□□ 1.19
CPNE1-220ENST00000458038 MATKP42679 507 aa22.46■■□□□ 1.19
CPNE1-220ENST00000458038 ZBTB16Q05516 673 aa22.46■■□□□ 1.19
CPNE1-220ENST00000458038 ADIGQ0VDE8 80 aa22.46■■□□□ 1.19
CPNE1-220ENST00000458038 DCAF17Q5H9S7 520 aaPredicted RBP22.46■■□□□ 1.19
CPNE1-220ENST00000458038 MPP7Q5T2T1 576 aa22.46■■□□□ 1.19
CPNE1-220ENST00000458038 KIAA0907Q7Z7F0 614 aaPredicted RBP22.46■■□□□ 1.19
CPNE1-220ENST00000458038 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.46■■□□□ 1.19
CPNE1-220ENST00000458038 CAMK1GQ96NX5 476 aa22.46■■□□□ 1.19
CPNE1-220ENST00000458038 GSDMAQ96QA5 445 aa22.46■■□□□ 1.19
CPNE1-220ENST00000458038 TMEM245Q9H330 911 aa22.46■■□□□ 1.19
CPNE1-220ENST00000458038 PCDHGB2Q9Y5G2 931 aa22.46■■□□□ 1.19
CPNE1-220ENST00000458038 TULP2O00295 520 aa22.45■■□□□ 1.18
CPNE1-220ENST00000458038 ATP5BP06576 529 aaKnown RBP22.45■■□□□ 1.18
CPNE1-220ENST00000458038 FTH1P19P0C7X4 201 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms