RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 FMNL3Q8IVF7 1028 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 PNPLA1Q8N8W4 532 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 IPO4Q8TEX9 1081 aaKnown RBP16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 DDI1Q8WTU0 396 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 UCMAQ8WVF2 138 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 EDEM1Q92611 657 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 PILRBQ9UKJ0 227 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 HCN2Q9UL51 889 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 CYP8B1Q9UNU6 501 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 GPSM3Q9Y4H4 160 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 A0A1W2PQF6 199 aa16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 M0QYV0 167 aa16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 O00370 1275 aa16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 OPHN1O60890 802 aa16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 CISD3P0C7P0 127 aa16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 NDUFV2P19404 249 aa16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 ANP32AP39687 249 aaKnown RBP16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 DPP6P42658 865 aa16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 HARS2P49590 506 aaKnown RBP16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 RGS7P49802 495 aa16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 STX17P56962 302 aa16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 ARID5AQ03989 594 aa16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 GFPT1Q06210 699 aaPredicted RBP16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 FYB2Q5VWT5 728 aa16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 ANKS1BQ7Z6G8 1248 aa16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 KIAA1257Q9ULG3 409 aa16.46■□□□□ 0.23
CHCHD3-204ENST00000457942 GON4LQ3T8J9 2241 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 PIK3R2O00459 728 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 ZNF217O75362 1048 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 PENKP01210 267 aaPredicted RBP16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 PAEPP09466 180 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 MFAP3P55082 362 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 PM20D1Q6GTS8 502 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 TTI2Q6NXR4 508 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 ELOA2Q8IYF1 753 aaPredicted RBP16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 UBR7Q8N806 425 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 MDM1Q8TC05 714 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 GOLGA1Q92805 767 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 GABRG3Q99928 467 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 CIPCQ9C0C6 399 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 SFMBT1Q9UHJ3 866 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 SLC6A14Q9UN76 642 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 PCDH15Q96QU1 1955 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 PI4KAP42356 2102 aa16.45■□□□□ 0.22
CHCHD3-204ENST00000457942 WASH3PC4AMC7 463 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 H0Y626 953 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 GFRA2O00451 464 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 TSPAN3O60637 253 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 GADD45BO75293 160 aaPredicted RBP16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 NDUFS2O75306 463 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 TRIM16O95361 564 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 BRD2P25440 801 aaKnown RBP16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 RDXP35241 583 aaKnown RBP16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 PAK1Q13153 545 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 GEN1Q17RS7 908 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 DUOXA1Q1HG43 343 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 SPDYCQ5MJ68 293 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 BSPRYQ5W0U4 402 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 LCLAT1Q6UWP7 414 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 RRAGAQ7L523 313 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 RAB44Q7Z6P3 723 aaPredicted RBP16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 CPXM2Q8N436 756 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 RBBP8NLQ8NC74 664 aaPredicted RBP16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 HNRNPLLQ8WVV9 542 aaKnown RBP16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 KAT5Q92993 513 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 SLC6A17Q9H1V8 727 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 CNGB3Q9NQW8 809 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 ABCC13Q9NSE7 274 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 SLC27A6Q9Y2P4 619 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 HBS1LQ9Y450 684 aaKnown RBP16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 STON1Q9Y6Q2 735 aa16.44■□□□□ 0.22
CHCHD3-204ENST00000457942 BPTFQ12830 3046 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 IGHV1OR15-9A0A0B4J2B8 117 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 YJEFN3A6XGL0 299 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 PPP1R3GB7ZBB8 358 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 E7ENQ6 273 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 P4HA2O15460 535 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 MSI1O43347 362 aaKnown RBP16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 SH3BP5O60239 455 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 SYNCRIPO60506 623 aaKnown RBP16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 GNA14O95837 355 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 KRT5P13647 590 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 CD59P13987 128 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 DAOAP59103 153 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 MORC3Q14149 939 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 E2F5Q15329 346 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 STILQ15468 1287 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 MPPE1Q53F39 396 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 BHLHA9Q7RTU4 235 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 CREBRFQ8IUR6 639 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 KCTD13Q8WZ19 329 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 TFAP2BQ92481 460 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 P2RY11Q96G91 374 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 HSPA12BQ96MM6 686 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 CD93Q9NPY3 652 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 FBXO10Q9UK96 956 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 RAXQ9Y2V3 346 aa16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.43■□□□□ 0.22
CHCHD3-204ENST00000457942 NPC1O15118 1278 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms