RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 NPWQ8N729 165 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 RIN3Q8TB24 985 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 SLC35B2Q8TB61 432 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 ACTL9Q8TC94 416 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 ADAMTS19Q8TE59 1207 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 C2orf15Q8WU43 125 aaKnown RBP9.07□□□□□ -0.96
RIF1-208ENST00000457745 UBXN4Q92575 508 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 PGAP3Q96FM1 320 aaPredicted RBP9.07□□□□□ -0.96
RIF1-208ENST00000457745 SLC39A13Q96H72 371 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 CSPG4P5Q96PW8 444 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 RNF157Q96PX1 679 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 CALN1Q9BXU9 219 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 KLC2Q9H0B6 622 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 RNF38Q9H0F5 515 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 MRPL17Q9NRX2 175 aaKnown RBP9.07□□□□□ -0.96
RIF1-208ENST00000457745 DDX56Q9NY93 547 aaKnown RBP9.07□□□□□ -0.96
RIF1-208ENST00000457745 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.07□□□□□ -0.96
RIF1-208ENST00000457745 FNIP2Q9P278 1114 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 FAM153AQ9UHL3 310 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 RAB21Q9UL25 225 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 DNPEPQ9ULA0 475 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 CHD7Q9P2D1 2997 aa9.07□□□□□ -0.96
RIF1-208ENST00000457745 DOCK4Q8N1I0 1966 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 ZNF840PA6NDX5 716 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 KCNU1A8MYU2 1149 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 CAPN9O14815 690 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 LPXNO60711 386 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 MOSPD3O75425 235 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 PAGE1O75459 146 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 IGLV3-27P01718 113 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 F11P03951 625 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 HMBSP08397 361 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 KRT7P08729 469 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 VAV1P15498 845 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 IVDP26440 423 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 CARSP49589 748 aaKnown RBP9.06□□□□□ -0.96
RIF1-208ENST00000457745 CLCN4P51793 760 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 ERVK-21P61565 698 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 RPL10AP62906 217 aaKnown RBP9.06□□□□□ -0.96
RIF1-208ENST00000457745 CYP4F8P98187 520 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 SCAPQ12770 1279 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 SMC1AQ14683 1233 aaKnown RBP9.06□□□□□ -0.96
RIF1-208ENST00000457745 OASLQ15646 514 aaKnown RBP9.06□□□□□ -0.96
RIF1-208ENST00000457745 HADHQ16836 314 aaKnown RBP9.06□□□□□ -0.96
RIF1-208ENST00000457745 TFDP3Q5H9I0 405 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 ZFYVE27Q5T4F4 411 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 MANEALQ5VSG8 457 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 TPGS2Q68CL5 300 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 SLC9A4Q6AI14 798 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 C8orf74Q6P047 294 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 ZDHHC24Q6UX98 284 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 GAREM2Q75VX8 874 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 BEND5Q7L4P6 421 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 DNAJB7Q7Z6W7 309 aaPredicted RBP9.06□□□□□ -0.96
RIF1-208ENST00000457745 JAMLQ86YT9 394 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 MRPL43Q8N983 215 aaKnown RBP9.06□□□□□ -0.96
RIF1-208ENST00000457745 KCTD6Q8NC69 237 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 DEPDC1BQ8WUY9 529 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 MAGOHBQ96A72 148 aaKnown RBP9.06□□□□□ -0.96
RIF1-208ENST00000457745 NTAN1Q96AB6 310 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 TCEAL4Q96EI5 215 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 RBM41Q96IZ5 413 aaKnown RBP9.06□□□□□ -0.96
RIF1-208ENST00000457745 ZFRQ96KR1 1074 aaKnown RBP9.06□□□□□ -0.96
RIF1-208ENST00000457745 PWWP2AQ96N64 755 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 TRIM31Q9BZY9 425 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 TKTL2Q9H0I9 626 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 DPH5Q9H2P9 285 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 LRRC19Q9H756 370 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 ENTPD7Q9NQZ7 604 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 GDF3Q9NR23 364 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 ARHGEF4Q9NR80 690 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 TLR9Q9NR96 1032 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 GKN1Q9NS71 199 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 NDFIP2Q9NV92 336 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 ARHGEF38Q9NXL2 777 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 GRHL1Q9NZI5 618 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 RNF14Q9UBS8 474 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 RASAL2Q9UJF2 1139 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 STAP1Q9ULZ2 295 aa9.06□□□□□ -0.96
RIF1-208ENST00000457745 HELZP42694 1942 aaKnown RBP9.05□□□□□ -0.96
RIF1-208ENST00000457745 NUP205Q92621 2012 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 DCLK1O15075 740 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 CCL16O15467 120 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 DAPK3O43293 454 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 COCHO43405 550 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 GREM1O60565 184 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 MOCS2O96007 188 aaPredicted RBP9.05□□□□□ -0.96
RIF1-208ENST00000457745 KLKB1P03952 638 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 C8AP07357 584 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 SGSHP51688 502 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 SNX16P57768 344 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 GUCY2DQ02846 1103 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 KRT17Q04695 432 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 GAD2Q05329 585 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 GPM6BQ13491 265 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 KRT81Q14533 505 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 NOMO1Q15155 1222 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 SLC5A9Q2M3M2 681 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 PROX2Q3B8N5 592 aa9.05□□□□□ -0.96
RIF1-208ENST00000457745 BOLA3Q53S33 107 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms