RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 SERPINB11Q96P15 392 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 NPY6RQ99463 290 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.47□□□□□ -0.73
ATG4A-206ENST00000457035 DCLK3Q9C098 648 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 C8orf33Q9H7E9 229 aaPredicted RBP10.47□□□□□ -0.73
ATG4A-206ENST00000457035 ARHGEF3Q9NR81 526 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 FAM86C1Q9NVL1 165 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 RRN3Q9NYV6 651 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.47□□□□□ -0.73
ATG4A-206ENST00000457035 CALCOCO1Q9P1Z2 691 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 STOML2Q9UJZ1 356 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 AGO1Q9UL18 857 aaKnown RBP10.47□□□□□ -0.73
ATG4A-206ENST00000457035 NENFQ9UMX5 172 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 TLR6Q9Y2C9 796 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 ZNF510Q9Y2H8 683 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 SSU72P8A0A1W2PR75 194 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 C2CD4BA6NLJ0 364 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 KCNU1A8MYU2 1149 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 GFRA2O00451 464 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 IRAK2O43187 625 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 GJB6O95452 261 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 NFATC1O95644 943 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 CYP17A1P05093 508 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 KRT3P12035 628 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 TFE3P19532 575 aaPredicted RBP10.46□□□□□ -0.73
ATG4A-206ENST00000457035 CD72P21854 359 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 RRM1P23921 792 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 CTHP32929 405 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 RFC1P35251 1148 aaPredicted RBP10.46□□□□□ -0.73
ATG4A-206ENST00000457035 HARS2P49590 506 aaKnown RBP10.46□□□□□ -0.73
ATG4A-206ENST00000457035 TCF15Q12870 199 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 NR1H3Q13133 447 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 FZD5Q13467 585 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 TSR1Q2NL82 804 aaKnown RBP10.46□□□□□ -0.73
ATG4A-206ENST00000457035 SLC25A52Q3SY17 297 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 LY6G5CQ5SRR4 150 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 OTUD1Q5VV17 481 aaPredicted RBP10.46□□□□□ -0.73
ATG4A-206ENST00000457035 PLEKHA7Q6IQ23 1121 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 ALKBH5Q6P6C2 394 aaKnown RBP10.46□□□□□ -0.73
ATG4A-206ENST00000457035 TXNDC11Q6PKC3 985 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 VPS36Q86VN1 386 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 RALGPS2Q86X27 583 aaPredicted RBP10.46□□□□□ -0.73
ATG4A-206ENST00000457035 TMEM25Q86YD3 366 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 DENND1CQ8IV53 801 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 UNC45BQ8IWX7 931 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 FAM217AQ8IXS0 508 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 EMC1Q8N766 993 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 C3orf20Q8ND61 904 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 JOSD2Q8TAC2 188 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 PGAP3Q96FM1 320 aaPredicted RBP10.46□□□□□ -0.73
ATG4A-206ENST00000457035 P2RY11Q96G91 374 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 SHDQ96IW2 340 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 PRRX2Q99811 253 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 SPHK2Q9NRA0 654 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 ZNHIT6Q9NWK9 470 aaKnown RBP10.46□□□□□ -0.73
ATG4A-206ENST00000457035 LSM7Q9UK45 103 aaKnown RBP10.46□□□□□ -0.73
ATG4A-206ENST00000457035 PIAS3Q9Y6X2 628 aa10.46□□□□□ -0.73
ATG4A-206ENST00000457035 CACNA1HO95180 2353 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 KANSL1LA0AUZ9 987 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 SPECC1L-ADORA2AF8WAN1 911 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 M0QYT0 321 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 MAN2B1O00754 1011 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 TRDMT1O14717 391 aaKnown RBP10.45□□□□□ -0.74
ATG4A-206ENST00000457035 ENDOD1O94919 500 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 LATS1O95835 1130 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 CDC25BP30305 580 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 AVPR2P30518 371 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 GBP1P32455 592 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 CHKAP35790 457 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 GALK1P51570 392 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 RPL7AP62424 266 aaKnown RBP10.45□□□□□ -0.74
ATG4A-206ENST00000457035 MAMLD1Q13495 774 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 SLC18A3Q16572 532 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 CCDC14Q49A88 953 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 ZC3H12AQ5D1E8 599 aaKnown RBP10.45□□□□□ -0.74
ATG4A-206ENST00000457035 ADGRF1Q5T601 910 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 NUGGCQ68CJ6 796 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 ZNF852Q6ZMS4 543 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 TPRG1Q6ZUI0 275 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 CPXM2Q8N436 756 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 CPA6Q8N4T0 437 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 RXFP2Q8WXD0 754 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 CENPIQ92674 756 aaPredicted RBP10.45□□□□□ -0.74
ATG4A-206ENST00000457035 CFAP57Q96MR6 1250 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 SELENOOQ9BVL4 669 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 NHEJ1Q9H9Q4 299 aaPredicted RBP10.45□□□□□ -0.74
ATG4A-206ENST00000457035 TBC1D17Q9HA65 648 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 FBRSL1Q9HCM7 1045 aaKnown RBP10.45□□□□□ -0.74
ATG4A-206ENST00000457035 METTL5Q9NRN9 209 aaKnown RBP10.45□□□□□ -0.74
ATG4A-206ENST00000457035 PIGVQ9NUD9 493 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.45□□□□□ -0.74
ATG4A-206ENST00000457035 DDIT4Q9NX09 232 aa10.45□□□□□ -0.74
ATG4A-206ENST00000457035 MTF2Q9Y483 593 aaPredicted RBP10.45□□□□□ -0.74
ATG4A-206ENST00000457035 GOLGA6L7A0A1B0GV03 622 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 PI15O43692 258 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 ACSL4O60488 711 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 F9P00740 461 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 PDGFRAP16234 1089 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 OPRD1P41143 372 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 SLC6A11P48066 632 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms