RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 OXNAD1Q96HP4 312 aaPredicted RBP12.84□□□□□ -0.35
LINC00959-201ENST00000456581 EBF4Q9BQW3 602 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 TLE6Q9H808 572 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 IL1RAPL1Q9NZN1 696 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 LNPEPQ9UIQ6 1025 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 LAMA3Q16787 3333 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 MANSC4A6NHS7 340 aaPredicted RBP12.84□□□□□ -0.35
LINC00959-201ENST00000456581 A8MXQ7 604 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 H7C0C1 242 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 PDGFRAP16234 1089 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 ATP5OP48047 213 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 ALDH18A1P54886 795 aaKnown RBP12.84□□□□□ -0.35
LINC00959-201ENST00000456581 POLE2P56282 527 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 MRPS5P82675 430 aaKnown RBP12.84□□□□□ -0.35
LINC00959-201ENST00000456581 KLHL38Q2WGJ6 581 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 ZC3H12AQ5D1E8 599 aaKnown RBP12.84□□□□□ -0.35
LINC00959-201ENST00000456581 TWF2Q6IBS0 349 aaKnown RBP12.84□□□□□ -0.35
LINC00959-201ENST00000456581 ATG14Q6ZNE5 492 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 NIPA2Q8N8Q9 360 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 SMG8Q8ND04 991 aaKnown RBP12.84□□□□□ -0.35
LINC00959-201ENST00000456581 FAF2Q96CS3 445 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 DCLRE1BQ9H816 532 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 DDX56Q9NY93 547 aaKnown RBP12.84□□□□□ -0.35
LINC00959-201ENST00000456581 PPARGC1AQ9UBK2 798 aaKnown RBP12.84□□□□□ -0.35
LINC00959-201ENST00000456581 USP18Q9UMW8 372 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 IPPQ9Y573 584 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 C17orf102A2RUQ5 167 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 B2RBV5 119 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 E7ESA3 106 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 PSMG1O95456 288 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 APRTP07741 180 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 RGS2P41220 211 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 CPT1AP50416 773 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 CRADDP78560 199 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 BST1Q10588 318 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 MROH9Q5TGP6 573 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 SCYL2Q6P3W7 929 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 CCDC110Q8TBZ0 833 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 KBTBD7Q8WVZ9 684 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 LPPQ93052 612 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 APOPT1Q96IL0 206 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 VPS11Q9H270 941 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 PCMTD2Q9NV79 361 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 PACSIN3Q9UKS6 424 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 MCF2LO15068 1137 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 KCNN4O15554 427 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 LUC7L3O95232 432 aaKnown RBP12.83□□□□□ -0.36
LINC00959-201ENST00000456581 ACAT1P24752 427 aaKnown RBP12.83□□□□□ -0.36
LINC00959-201ENST00000456581 PGM1P36871 562 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 GABRB2P47870 512 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 KYAT1Q16773 422 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 FAM47CQ5HY64 1035 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 CYP4V2Q6ZWL3 525 aaPredicted RBP12.83□□□□□ -0.36
LINC00959-201ENST00000456581 RBM15BQ8NDT2 890 aaKnown RBP12.83□□□□□ -0.36
LINC00959-201ENST00000456581 BEST2Q8NFU1 509 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 SLC44A1Q8WWI5 657 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 KHSRPQ92945 711 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00959-201ENST00000456581 TTC1Q99614 292 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 PLEKHA5Q9HAU0 1116 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 NGRNQ9NPE2 291 aaKnown RBP12.83□□□□□ -0.36
LINC00959-201ENST00000456581 TEX264Q9Y6I9 313 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 C2CD4BA6NLJ0 364 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 TM9SF1O15321 606 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 PAPSS1O43252 624 aaPredicted RBP12.83□□□□□ -0.36
LINC00959-201ENST00000456581 LYPLA1O75608 230 aaPredicted RBP12.83□□□□□ -0.36
LINC00959-201ENST00000456581 DHRS4L1P0CG22 281 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 CSH1P0DML2 217 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 CSH2P0DML3 217 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 ETS2P15036 469 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 RBL1P28749 1068 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 YWHAZP63104 245 aaKnown RBP12.83□□□□□ -0.36
LINC00959-201ENST00000456581 TMPRSS15P98073 1019 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 KLC1Q07866 573 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 CHI3L2Q15782 390 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 CA9Q16790 459 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 HADHQ16836 314 aaKnown RBP12.83□□□□□ -0.36
LINC00959-201ENST00000456581 FBXO47Q5MNV8 452 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 C16orf46Q6P387 395 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 LRRC74BQ6ZQY2 392 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 TRIB2Q92519 343 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 APBA2Q99767 749 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 ACSS2Q9NR19 701 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 CNTN3Q9P232 1028 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 TTLL3Q9Y4R7 772 aa12.83□□□□□ -0.36
LINC00959-201ENST00000456581 COPEO14579 308 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 TRUB2O95900 331 aaKnown RBP12.82□□□□□ -0.36
LINC00959-201ENST00000456581 RARBP10826 455 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 AQP5P55064 265 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 ROR1Q01973 937 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 PKDCCQ504Y2 493 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 CEP128Q6ZU80 1094 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 LMNTD2Q8IXW0 634 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 TEX9Q8N6V9 391 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 POU5F2Q8N7G0 328 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 TSC22D3Q99576 134 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 OCEL1Q9H607 264 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 SAR1AQ9NR31 198 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 PAPOLBQ9NRJ5 636 aaKnown RBP12.82□□□□□ -0.36
LINC00959-201ENST00000456581 SPATS2LQ9NUQ6 558 aaKnown RBP12.82□□□□□ -0.36
LINC00959-201ENST00000456581 PPM1HQ9ULR3 514 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms