RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 LAMB4A4D0S4 1761 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PTPRMP28827 1452 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 TTC26A0AVF1 554 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ENC1O14682 589 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 RXRAP19793 462 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PSMA1P25786 263 aaKnown RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PLOD1Q02809 727 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 LONP2Q86WA8 852 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 SRBD1Q8N5C6 995 aaKnown RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 CCDC185Q8N715 623 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 RFKQ969G6 155 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 CREB3L1Q96BA8 519 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 KIFC1Q9BW19 673 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 MTIF3Q9H2K0 278 aaKnown RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ARMT1Q9H993 441 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 COPS7BQ9H9Q2 264 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 MGAT4AQ9UM21 535 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PIPSLA2A3N6 862 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 FOXO3O43524 673 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 SGTAO43765 313 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 SERPINA6P08185 405 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 CFL1P23528 166 aaKnown RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 TRAF3Q13114 568 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 SYDE2Q5VT97 1194 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 IYDQ6PHW0 289 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 FAM47EQ6ZV65 393 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ADAM32Q8TC27 787 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ITFG2Q969R8 447 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PANX3Q96QZ0 392 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PCDHGB1Q9Y5G3 927 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PCDHA10Q9Y5I2 948 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 USP17L12C9JPN9 530 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 USP17L21D6R901 530 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 FAM47E-STBD1D6RA91 191 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 EGFRP00533 1210 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 CYP1A2P05177 515 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 KDSRQ06136 332 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 MTMR1Q13613 665 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ATP6AP1LQ52LC2 224 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ZNF746Q6NUN9 644 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 DDIASQ8IXT1 998 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 LRRC17Q8N6Y2 441 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 RDH12Q96NR8 316 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 CDH19Q9H159 772 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 XPO7Q9UIA9 1087 aaKnown RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ZMYM5Q9UJ78 669 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 SNX7Q9UNH6 387 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 B2RBV5 119 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 PHGDHO43175 533 aaKnown RBP5.34□□□□□ -1.56
CSMD3-204ENST00000455883 NBNO60934 754 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 UCHL3P15374 230 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 PNLIPRP1P54315 467 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 NCAPHQ15003 741 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 KIZQ2M2Z5 673 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 TCEAL5Q5H9L2 206 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 ZDHHC20Q5W0Z9 365 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 RASSF6Q6ZTQ3 369 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.34□□□□□ -1.56
CSMD3-204ENST00000455883 ZC3HC1Q86WB0 502 aaKnown RBP5.34□□□□□ -1.56
CSMD3-204ENST00000455883 POC5Q8NA72 575 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 AFG1LQ8WV93 481 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 ZFP57Q9NU63 452 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 PKP3Q9Y446 797 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 PHF20L1A8MW92 1017 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 MLYCDO95822 493 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 GCNT1Q02742 428 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 VPS26BQ4G0F5 336 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 COBLL1Q53SF7 1204 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 C3orf62Q6ZUJ4 267 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 TMEM26Q6ZUK4 368 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 DHX40Q8IX18 779 aaKnown RBP5.34□□□□□ -1.56
CSMD3-204ENST00000455883 TBC1D21Q8IYX1 336 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 C8orf59Q8N0T1 100 aaPredicted RBP5.34□□□□□ -1.56
CSMD3-204ENST00000455883 PGBD4Q96DM1 585 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 AGPAT1Q99943 283 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 ARL15Q9NXU5 204 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 ABCC6O95255 1503 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 ZSCAN9O15535 394 aaPredicted RBP5.34□□□□□ -1.56
CSMD3-204ENST00000455883 TGFB3P10600 412 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 PSEN1P49768 467 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 HSF2Q03933 536 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 COASYQ13057 564 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 GRM3Q14832 879 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 CYB5RLQ6IPT4 315 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 SPIRE2Q8WWL2 714 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 HES6Q96HZ4 224 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 ERMAPQ96PL5 475 aaPredicted RBP5.34□□□□□ -1.56
CSMD3-204ENST00000455883 HOPXQ9BPY8 73 aaPredicted RBP5.34□□□□□ -1.56
CSMD3-204ENST00000455883 NIF3L1Q9GZT8 377 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 LRMDAQ9H2I8 198 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 PCYOX1Q9UHG3 505 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 CDH9Q9ULB4 789 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 CDH7Q9ULB5 785 aa5.34□□□□□ -1.56
CSMD3-204ENST00000455883 GNRH1P01148 92 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 KCNA6P17658 529 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ITGALP20701 1170 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CDC42P60953 191 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 OTUD4Q01804 1114 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms