RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 NFE2L3Q9Y4A8 694 aa22.1■■□□□ 1.13
HMGB3-205ENST00000455596 FRYLO94915 3013 aa22.09■■□□□ 1.13
HMGB3-205ENST00000455596 A0A1W2PQF6 199 aa22.09■■□□□ 1.13
HMGB3-205ENST00000455596 CAPN9O14815 690 aa22.09■■□□□ 1.13
HMGB3-205ENST00000455596 NPC1O15118 1278 aa22.09■■□□□ 1.13
HMGB3-205ENST00000455596 PAPSS1O43252 624 aaPredicted RBP22.09■■□□□ 1.13
HMGB3-205ENST00000455596 BCKDHBP21953 392 aa22.09■■□□□ 1.13
HMGB3-205ENST00000455596 HOXD9P28356 352 aaPredicted RBP22.09■■□□□ 1.13
HMGB3-205ENST00000455596 CREB5Q02930 508 aa22.09■■□□□ 1.13
HMGB3-205ENST00000455596 PDCLQ13371 301 aa22.09■■□□□ 1.13
HMGB3-205ENST00000455596 NNTQ13423 1086 aa22.09■■□□□ 1.13
HMGB3-205ENST00000455596 E2F5Q15329 346 aa22.09■■□□□ 1.13
HMGB3-205ENST00000455596 PLA2G2CQ5R387 149 aa22.09■■□□□ 1.13
HMGB3-205ENST00000455596 DGLUCYQ7Z3D6 616 aa22.09■■□□□ 1.13
HMGB3-205ENST00000455596 C12orf50Q8NA57 414 aaPredicted RBP22.09■■□□□ 1.13
HMGB3-205ENST00000455596 NETO1Q8TDF5 533 aa22.09■■□□□ 1.13
HMGB3-205ENST00000455596 IPO4Q8TEX9 1081 aaKnown RBP22.09■■□□□ 1.13
HMGB3-205ENST00000455596 IRX2Q9BZI1 471 aaPredicted RBP22.09■■□□□ 1.13
HMGB3-205ENST00000455596 POPDC2Q9HBU9 364 aa22.09■■□□□ 1.13
HMGB3-205ENST00000455596 CACNA2D2Q9NY47 1150 aa22.09■■□□□ 1.13
HMGB3-205ENST00000455596 TLR6Q9Y2C9 796 aa22.09■■□□□ 1.13
HMGB3-205ENST00000455596 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.08■■□□□ 1.13
HMGB3-205ENST00000455596 FOXN3O00409 490 aaPredicted RBP22.08■■□□□ 1.13
HMGB3-205ENST00000455596 ACSL4O60488 711 aa22.08■■□□□ 1.13
HMGB3-205ENST00000455596 FOXK2Q01167 660 aa22.08■■□□□ 1.13
HMGB3-205ENST00000455596 KCNMA1Q12791 1236 aa22.08■■□□□ 1.13
HMGB3-205ENST00000455596 EIF4HQ15056 248 aaKnown RBP22.08■■□□□ 1.13
HMGB3-205ENST00000455596 KIAA1211LQ6NV74 962 aa22.08■■□□□ 1.13
HMGB3-205ENST00000455596 PASD1Q8IV76 773 aa22.08■■□□□ 1.13
HMGB3-205ENST00000455596 AZIN2Q96A70 460 aa22.08■■□□□ 1.13
HMGB3-205ENST00000455596 LHX5Q9H2C1 402 aa22.08■■□□□ 1.13
HMGB3-205ENST00000455596 VPS45Q9NRW7 570 aa22.08■■□□□ 1.13
HMGB3-205ENST00000455596 THAP10Q9P2Z0 257 aaPredicted RBP22.08■■□□□ 1.13
HMGB3-205ENST00000455596 RAD54BQ9Y620 910 aa22.08■■□□□ 1.13
HMGB3-205ENST00000455596 STON1Q9Y6Q2 735 aa22.08■■□□□ 1.13
HMGB3-205ENST00000455596 WASH3PC4AMC7 463 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 IRAK2O43187 625 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 MAP3K13O43283 966 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 CLCN1P35523 988 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 KRT9P35527 623 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 BPIFB4P59827 614 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 YWHAZP63104 245 aaKnown RBP22.07■■□□□ 1.12
HMGB3-205ENST00000455596 RAPGEF1Q13905 1077 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 SF3A2Q15428 464 aaKnown RBP22.07■■□□□ 1.12
HMGB3-205ENST00000455596 MAP7D1Q3KQU3 841 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 AASDHQ4L235 1098 aaPredicted RBP22.07■■□□□ 1.12
HMGB3-205ENST00000455596 SYPL2Q5VXT5 272 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 DPY19L2P1Q6NXN4 242 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 SASS6Q6UVJ0 657 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 TAC4Q86UU9 113 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 SLC47A2Q86VL8 602 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 WDTC1Q8N5D0 677 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 PPP1R13BQ96KQ4 1090 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 FCRL2Q96LA5 508 aaPredicted RBP22.07■■□□□ 1.12
HMGB3-205ENST00000455596 NOX5Q96PH1 765 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 CPXM1Q96SM3 734 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 DDX50Q9BQ39 737 aaKnown RBP22.07■■□□□ 1.12
HMGB3-205ENST00000455596 RTKNQ9BST9 563 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 CD248Q9HCU0 757 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 ELOVL2Q9NXB9 296 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 CALCOCO1Q9P1Z2 691 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 CEP83Q9Y592 693 aa22.07■■□□□ 1.12
HMGB3-205ENST00000455596 MUC22E2RYF6 1773 aaPredicted RBP22.07■■□□□ 1.12
HMGB3-205ENST00000455596 GOLGA6L7A0A1B0GV03 622 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 BCLAF3A2AJT9 711 aaKnown RBP22.06■■□□□ 1.12
HMGB3-205ENST00000455596 TIMM44O43615 452 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 PNMA6AP0CW24 399 aaPredicted RBP22.06■■□□□ 1.12
HMGB3-205ENST00000455596 SLC6A4P31645 630 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 ATXN1P54253 815 aaKnown RBP22.06■■□□□ 1.12
HMGB3-205ENST00000455596 ARID5AQ03989 594 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 STARD3Q14849 445 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 DRAP1Q14919 205 aaPredicted RBP22.06■■□□□ 1.12
HMGB3-205ENST00000455596 FAM133BQ5BKY9 247 aaKnown RBP22.06■■□□□ 1.12
HMGB3-205ENST00000455596 MPP7Q5T2T1 576 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 PIK3R6Q5UE93 754 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 KLHDC7AQ5VTJ3 777 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 RFWD3Q6PCD5 774 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 LPCAT2Q7L5N7 544 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 FAM71AQ8IYT1 594 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 ADAM32Q8TC27 787 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 ERLEC1Q96DZ1 483 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 SLC39A13Q96H72 371 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 LSM14BQ9BX40 385 aaKnown RBP22.06■■□□□ 1.12
HMGB3-205ENST00000455596 CIPCQ9C0C6 399 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 TAB2Q9NYJ8 693 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 TJP2Q9UDY2 1190 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 FHOD1Q9Y613 1164 aa22.06■■□□□ 1.12
HMGB3-205ENST00000455596 GDF9O60383 454 aa22.05■■□□□ 1.12
HMGB3-205ENST00000455596 TBL1XO60907 577 aa22.05■■□□□ 1.12
HMGB3-205ENST00000455596 CAVIN2O95810 425 aa22.05■■□□□ 1.12
HMGB3-205ENST00000455596 TPM2P07951 284 aa22.05■■□□□ 1.12
HMGB3-205ENST00000455596 NDUFV2P19404 249 aa22.05■■□□□ 1.12
HMGB3-205ENST00000455596 HLA-FP30511 346 aa22.05■■□□□ 1.12
HMGB3-205ENST00000455596 IL12RB1P42701 662 aa22.05■■□□□ 1.12
HMGB3-205ENST00000455596 DHPSP49366 369 aaPredicted RBP22.05■■□□□ 1.12
HMGB3-205ENST00000455596 SGSHP51688 502 aa22.05■■□□□ 1.12
HMGB3-205ENST00000455596 SNX16P57768 344 aa22.05■■□□□ 1.12
HMGB3-205ENST00000455596 ENPP2Q13822 863 aa22.05■■□□□ 1.12
HMGB3-205ENST00000455596 ZNF234Q14588 700 aa22.05■■□□□ 1.12
HMGB3-205ENST00000455596 NADSYN1Q6IA69 706 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms