RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 OTOP2Q7RTS6 562 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 TMEM110Q86TL2 294 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 VPS52Q8N1B4 723 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 KIF2BQ8N4N8 673 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 EMC1Q8N766 993 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 PLD5Q8N7P1 536 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 FAM13CQ8NE31 585 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 GSDMBQ8TAX9 411 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 UTP4Q969X6 686 aaKnown RBP10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 SKA1Q96BD8 255 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 ACSF2Q96CM8 615 aaPredicted RBP10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 ACAP3Q96P50 834 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 WDR83Q9BRX9 315 aaKnown RBP10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 WWP1Q9H0M0 922 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 MTIF3Q9H2K0 278 aaKnown RBP10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 PDZD7Q9H5P4 517 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 USP29Q9HBJ7 922 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 PCDH18Q9HCL0 1135 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 VTA1Q9NP79 307 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 NPHS2Q9NP85 383 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 EIF2B3Q9NR50 452 aaKnown RBP10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 ETNK2Q9NVF9 386 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 DPP3Q9NY33 737 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 THEGQ9P2T0 379 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 HESX1Q9UBX0 185 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 PCSK1NQ9UHG2 260 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 HAO1Q9UJM8 370 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 TSPAN16Q9UKR8 245 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 YBX2Q9Y2T7 364 aaKnown RBP10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 TTLL3Q9Y4R7 772 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 LRRC42Q9Y546 428 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 XIRP2A4UGR9 3374 aa10.94□□□□□ -0.66
GTF3C2-206ENST00000454704 RBM47A0AV96 593 aaKnown RBP10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 PEX11AO75192 247 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 ARIH2O95376 493 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 APOEP02649 317 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 FGBP02675 491 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 CD48P09326 243 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 FAM163BP0C2L3 166 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 TXNP10599 105 aaKnown RBP10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 NEFHP12036 1026 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 GNAZP19086 355 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 MAGEA3P43357 314 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 RAP1GAPP47736 663 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 SERPINB4P48594 390 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 RPL34P49207 117 aaKnown RBP10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 NDST1P52848 882 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 RABGGTBP53611 331 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 CTC1Q2NKJ3 1217 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 NBPF20Q3BBV1 942 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 KBTBD12Q3ZCT8 623 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 PKDCCQ504Y2 493 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 ANKRD20A2Q5SQ80 823 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 ANKRD20A1Q5TYW2 823 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 TAPT1Q6NXT6 567 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 KYAT3Q6YP21 454 aaKnown RBP10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 CAPN12Q6ZSI9 719 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 FAM183BPQ6ZVS7 135 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 LONP2Q86WA8 852 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 LMNTD2Q8IXW0 634 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 GPATCH11Q8N954 259 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 MIEF2Q96C03 454 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 PEBP4Q96S96 227 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 POPDC2Q9HBU9 364 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 RAB6BQ9NRW1 208 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 DONSONQ9NYP3 566 aa10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 ZC3H7BQ9UGR2 993 aaKnown RBP10.93□□□□□ -0.66
GTF3C2-206ENST00000454704 TCRBV7S3A2A0A539 114 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 A6NJR5 290 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 FAM159BA6NKW6 160 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 E5RJQ4 531 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 KCNN4O15554 427 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 B4GALT5O43286 388 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 XPOTO43592 962 aaKnown RBP10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 MAGEC1O60732 1142 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 DIAPH2O60879 1101 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 STK10O94804 968 aaKnown RBP10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 C1QAP02745 245 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 TPBGLP0DKB5 382 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 ACADSP16219 412 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 CDH8P55286 799 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 ZBTB16Q05516 673 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 SF3A3Q12874 501 aaKnown RBP eCLIP10.92□□□□□ -0.662e-6■■■□□ 16.1
GTF3C2-206ENST00000454704 SEMA5AQ13591 1074 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 EFTUD2Q15029 972 aaKnown RBP eCLIP10.92□□□□□ -0.663e-12■■■■□ 23.4
GTF3C2-206ENST00000454704 SLC10A6Q3KNW5 377 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 DNAL1Q4LDG9 190 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 OLFML1Q6UWY5 402 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 MARK2Q7KZI7 788 aaKnown RBP10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 SLC26A9Q7LBE3 791 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 STRADAQ7RTN6 431 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 CEP120Q8N960 986 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 ADAMTS19Q8TE59 1207 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 SPOCK2Q92563 424 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 CENPIQ92674 756 aaPredicted RBP10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 CDKL2Q92772 493 aa10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 PTCD3Q96EY7 689 aaKnown RBP10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 QKIQ96PU8 341 aaKnown RBP eCLIP10.92□□□□□ -0.66
GTF3C2-206ENST00000454704 ASB2Q96Q27 587 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms