RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 NLRC3Q7RTR2 1065 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 SRGAP1Q7Z6B7 1085 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 PRIMA1Q86XR5 153 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 MIB1Q86YT6 1006 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 EFCAB13Q8IY85 973 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 KIF1BPQ96EK5 621 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 CCDC51Q96ER9 411 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 TOE1Q96GM8 510 aaKnown RBP5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 FAM167AQ96KS9 214 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 MRGPRX1Q96LB2 322 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 DHRS1Q96LJ7 313 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 KAT14Q9H8E8 782 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 NRBP2Q9NSY0 501 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 DUS2Q9NX74 493 aaKnown RBP5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 GABBR1Q9UBS5 961 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 EIF2B4Q9UI10 523 aaKnown RBP5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 PPT2Q9UMR5 302 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 ENTPD4Q9Y227 616 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 YIPF1Q9Y548 306 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 ASB3Q9Y575 518 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 PCDHGA8Q9Y5G5 932 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 PCDHA10Q9Y5I2 948 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 ANK1P16157 1881 aa5.73□□□□□ -1.49
SBDSP1-204ENST00000453858 SVEP1Q4LDE5 3571 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 DDX39AO00148 427 aaKnown RBP5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 DFNA5O60443 496 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 TSPAN1O60635 241 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 B3GAT3O94766 335 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 KAT7O95251 611 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 FGF19O95750 216 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 NCAM1P13591 858 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 NME1P15531 152 aaKnown RBP5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 CD6P30203 668 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 KIF5BP33176 963 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 BRCC3P46736 316 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 ARPP19P56211 112 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 TGIF1Q15583 401 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 UGCGQ16739 394 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 UPP1Q16831 310 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 PRAMEF14Q5SWL7 426 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 XYLT1Q86Y38 959 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 FAM114A1Q8IWE2 563 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 PHACTR4Q8IZ21 702 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 TRMT2AQ8IZ69 625 aaKnown RBP5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 EID2Q8N6I1 236 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 ATP2A3Q93084 1043 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 DRC1Q96MC2 740 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 NLRP4Q96MN2 994 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 MTMR9Q96QG7 549 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 ORAI3Q9BRQ5 295 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 DUSP23Q9BVJ7 150 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 GPR174Q9BXC1 333 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 SLC6A17Q9H1V8 727 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 ITM2CQ9NQX7 267 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 TOMM22Q9NS69 142 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 USP36Q9P275 1121 aaKnown RBP5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 KLHL3Q9UH77 587 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 ERRFI1Q9UJM3 462 aaPredicted RBP5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 PCDHA6Q9UN73 950 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 PCDHA8Q9Y5H6 950 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 NUMA1Q14980 2115 aa5.72□□□□□ -1.49
SBDSP1-204ENST00000453858 ARID2Q68CP9 1835 aa5.71□□□□□ -1.49
SBDSP1-204ENST00000453858 TMEM150BA6NC51 233 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 KCNJ18B7U540 433 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 OPA1O60313 960 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 CSO75390 466 aaKnown RBP5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 THP07101 528 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 PCP11498 1178 aaKnown RBP5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 GUCY2CP25092 1073 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 SMARCA1P28370 1054 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 AXLP30530 894 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 DNM2P50570 870 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 CLCNKBP51801 687 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 EPHB3P54753 998 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 POLE2P56282 527 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 GRIN1Q05586 938 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 SLFN5Q08AF3 891 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 DUSP4Q13115 394 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 MTF1Q14872 753 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 ZNF77Q15935 545 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 ARHGAP15Q53QZ3 475 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 ARSHQ5FYA8 562 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 ARTNQ5T4W7 220 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 SFMBT2Q5VUG0 894 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 OVOS1Q6IE37 1185 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 CENPPQ6IPU0 288 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 CC2D1AQ6P1N0 951 aaPredicted RBP5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 LETMD1Q6P1Q0 360 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 NOTUMQ6P988 496 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 LAYNQ6UX15 382 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 TBC1D10CQ8IV04 446 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 OTUD7AQ8TE49 926 aaPredicted RBP5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 PRPF31Q8WWY3 499 aaKnown RBP5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 CUL5Q93034 780 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 CPB2Q96IY4 423 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 OSBPL1AQ9BXW6 950 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 PSTPIP2Q9H939 334 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 TM9SF3Q9HD45 589 aa5.71□□□□□ -1.5
SBDSP1-204ENST00000453858 ZNF71Q9NQZ8 489 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms